Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   PYW37_RS03075 Genome accession   NZ_CP118969
Coordinates   586783..587484 (+) Length   233 a.a.
NCBI ID   WP_004255173.1    Uniprot ID   S6FFV7
Organism   Lactococcus lactis strain DSM 20481     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 581783..592484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW37_RS03060 - 584178..585086 (+) 909 WP_039115860.1 diacylglycerol kinase family protein -
  PYW37_RS03065 - 585233..585919 (+) 687 WP_004255158.1 amino acid ABC transporter permease -
  PYW37_RS03070 - 585919..586653 (+) 735 WP_023188515.1 amino acid ABC transporter ATP-binding protein -
  PYW37_RS03075 mecA 586783..587484 (+) 702 WP_004255173.1 adaptor protein MecA Regulator
  PYW37_RS03080 - 587487..588818 (+) 1332 WP_021722251.1 MraY family glycosyltransferase -
  PYW37_RS03085 sufC 588993..589763 (+) 771 WP_004255181.1 Fe-S cluster assembly ATPase SufC -
  PYW37_RS03090 sufD 589901..591157 (+) 1257 WP_021722250.1 Fe-S cluster assembly protein SufD -
  PYW37_RS03095 - 591157..592374 (+) 1218 WP_023188516.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27077.46 Da        Isoelectric Point: 4.1246

>NTDB_id=796946 PYW37_RS03075 WP_004255173.1 586783..587484(+) (mecA) [Lactococcus lactis strain DSM 20481]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGTKKDEAEQEPDFIYYSIRYEDIMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKEKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLIATRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=796946 PYW37_RS03075 WP_004255173.1 586783..587484(+) (mecA) [Lactococcus lactis strain DSM 20481]
ATGAAATATGAGGATATAAACGAAAATACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAATT
ATCAGACTTTTTCGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTGGTTGATGAGCTTGGTTTAGAAAATCGCT
TTGGAAATGTGGGAATGTTAACTTTCCAAATCCAACCTTTTCCTCAAGGTGTTCATATGATTGTTCATGAAGAAGCGATG
CTAGGTGAAGGTGGAGAAATTCCAGATGACCCAGAAGAGTTTGAAGAATTGATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGGCTTGGTTTACCAGGAACAAAAAAAGACG
AAGCTGAACAAGAGCCAGATTTTATTTATTACTCTATTCGTTATGAAGATATTATGTCTGTCTTAACAGGAATAAAAAAT
GTGAAGTTTGCTGATGAAGAATCAGAGTTTTATCGTTATGATGGCAATTTTTATCTTGTTGTTTTGGATAATCAAAAAGA
AAAAGGCAAGATGCATGTTGAAAGTACCCGTTCACGAATGATGGAATATGGGGAAGCAACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGTCTTATCGCGACACGTGCTTTAGATGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB S6FFV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

99.571

100

0.996

  mecA Lactococcus lactis subsp. cremoris KW2

96.996

100

0.97