Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   QU709_RS17940 Genome accession   NZ_CP132593
Coordinates   4066175..4067299 (+) Length   374 a.a.
NCBI ID   WP_232031766.1    Uniprot ID   -
Organism   Streptomyces sp. YU58 strain SX92     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4061175..4072299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QU709_RS17925 (QU709_17935) - 4061846..4062637 (+) 792 WP_306504592.1 hypothetical protein -
  QU709_RS17930 (QU709_17940) - 4062695..4064467 (-) 1773 WP_306499868.1 BACON domain-containing protein -
  QU709_RS17935 (QU709_17945) radA/sms 4064684..4066093 (+) 1410 WP_232031767.1 DNA repair protein RadA Machinery gene
  QU709_RS17940 (QU709_17950) disA 4066175..4067299 (+) 1125 WP_232031766.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  QU709_RS17945 (QU709_17955) - 4067410..4068267 (-) 858 WP_306499869.1 hypothetical protein -
  QU709_RS17950 (QU709_17960) - 4068442..4069113 (+) 672 WP_306499870.1 phosphatase PAP2 family protein -
  QU709_RS17955 (QU709_17965) - 4069117..4069791 (-) 675 WP_306499871.1 response regulator transcription factor -
  QU709_RS17960 (QU709_17970) - 4069788..4071380 (-) 1593 WP_306499872.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40058.78 Da        Isoelectric Point: 4.9235

>NTDB_id=796799 QU709_RS17940 WP_232031766.1 4066175..4067299(+) (disA) [Streptomyces sp. YU58 strain SX92]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTSTRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLVALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALYELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=796799 QU709_RS17940 WP_232031766.1 4066175..4067299(+) (disA) [Streptomyces sp. YU58 strain SX92]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCATT
GAGCGCCGTGGCACCCGGCACCGCGCTGCGCGACGGCCTCGAACGGATCCTCCGGGGCAACACCGGCGGTCTCATCGTGC
TCGGCTCCGACAAGACCGTCGAAGCGATGTGTACGGGCGGATTCGTCCTGGATGTCGAGTTCACCTCGACGCGCCTGAGG
GAGCTGTGCAAGTTGGACGGCGGCATCGTGCTGTCCTCCGACCTGTCGAAGATCCTGCGGGCCGGCGTCCAGCTGGTGCC
CGACCCGACGATCCCCACCGAGGAGACGGGCACGCGGCACCGGACGGCTGACCGGGTCTCGAAGCAGGTCGGCTTCCCGG
TGGTCTCCGTCTCCCAGTCCATGCGGCTGGTCGCCCTCTACGTCGACGGCCAGCGCCGGGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCCGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCTCGGCCGTGGCCCAGCGCCTGGAGATGGTCCGCCGTATCG
CCACCGAGATCGCCGAGTACGTCGTCGAACTCGGCACCGACGGGCGCCTCCTGGCGCTCCAGCTGGACGAGCTCATCGCC
GGTGTGGAGCCCGAGCGCGAACTGGTCGTCCGGGACTACGTCCCCGAGCCCACCGCGAAGCGCTCCCGCACGGTCGAGGA
AGCCCTGTACGAACTCGACGCGCTCTCCCACGCCGAACTCCTGGAACTTCCCACGGTGGCGCGTGCCCTGGGCTACACCG
GATCACCGGAGGCCCTCGACTCCGCCGTCTCCCCCCGCGGCTTCCGCCTCCTGGCCAAGGTCCCGAGGCTCCCCGGCGCC
ATCATCGACCGTCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTCCTCGCCGCGAGCGTGGACGATCTCCAGACGGTGGA
CGGCGTGGGCGAGGCCCGGGCCCGGAGCGTCCGCGAGGGCCTGTCGAGGCTGGCGGAGAGCTCGATCCTGGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438