Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PYW32_RS04990 Genome accession   NZ_CP118957
Coordinates   945916..947178 (+) Length   420 a.a.
NCBI ID   WP_016175433.1    Uniprot ID   -
Organism   Enterococcus saccharolyticus subsp. saccharolyticus strain DSM 20726     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 940916..952178
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYW32_RS04965 tsf 941378..942259 (+) 882 WP_016175438.1 translation elongation factor Ts -
  PYW32_RS04970 pyrH 942393..943115 (+) 723 WP_016175437.1 UMP kinase -
  PYW32_RS04975 frr 943390..943947 (+) 558 WP_016175436.1 ribosome recycling factor -
  PYW32_RS04980 - 944131..944931 (+) 801 WP_016175435.1 isoprenyl transferase -
  PYW32_RS04985 - 944928..945731 (+) 804 WP_016175434.1 phosphatidate cytidylyltransferase -
  PYW32_RS04990 eeP 945916..947178 (+) 1263 WP_016175433.1 RIP metalloprotease RseP Regulator
  PYW32_RS04995 - 947210..948916 (+) 1707 WP_016175432.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45946.35 Da        Isoelectric Point: 4.8278

>NTDB_id=796793 PYW32_RS04990 WP_016175433.1 945916..947178(+) (eeP) [Enterococcus saccharolyticus subsp. saccharolyticus strain DSM 20726]
MKTVLVFLIVFSVVVVIHEFGHFYFAKRAGILVREFAIGMGPKLFSHQGKDGTTYTIRALPMGGYVRMAGYEEEEEIKAG
MQVGLVLDQKDTVVKINTSHKVQLTNAIPLEVAQQDLVDALTITGYVNGDESQTVTYPVAHDAIIIEEDGTEVRIAPRDV
QFQSAKLWQRMLTNFAGPMNNFLLTIAIFILAAFLNGGSADRNSTIINVVENGAAASAGLKDGDEIMAINQEPVENWAQV
SQIIQANPEKELQIEVKRENQTQTFTAVPKAIEAGEQKVGQLGIQAPLKTGFFDKIIGGFQESIAAFFRIIDALRSLLTN
FSIDQLGGPVAIFQLSSEAAKQGPMTVLMMTAMISINLGIFNLLPIPGLDGGKLLLNIIEGVRGKPLSQEKEGIITLVGF
GLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=796793 PYW32_RS04990 WP_016175433.1 945916..947178(+) (eeP) [Enterococcus saccharolyticus subsp. saccharolyticus strain DSM 20726]
ATGAAGACTGTTTTAGTATTTTTAATTGTCTTCTCGGTCGTGGTAGTTATTCATGAGTTTGGTCATTTTTATTTTGCGAA
ACGCGCCGGTATTTTAGTACGGGAATTTGCAATTGGCATGGGACCAAAACTATTTAGTCATCAAGGTAAAGATGGCACGA
CATATACCATTCGAGCCTTACCAATGGGTGGTTATGTCCGAATGGCTGGCTATGAAGAAGAAGAGGAAATTAAAGCAGGC
ATGCAAGTGGGGCTAGTATTGGATCAAAAAGATACTGTCGTTAAAATTAATACGAGTCATAAAGTCCAACTAACCAATGC
TATTCCTTTAGAAGTCGCGCAACAAGATTTAGTAGATGCGTTAACGATTACTGGCTATGTGAATGGCGATGAGAGTCAAA
CAGTTACTTATCCCGTTGCTCATGATGCGATAATCATTGAAGAAGATGGGACGGAAGTACGCATTGCCCCAAGAGATGTG
CAATTCCAATCTGCGAAATTATGGCAACGAATGTTGACGAATTTTGCTGGTCCGATGAACAATTTCTTATTAACGATTGC
TATTTTTATTTTAGCAGCTTTCCTTAATGGTGGTTCTGCGGATAGAAATTCGACAATAATAAATGTTGTTGAAAATGGAG
CTGCTGCAAGTGCAGGATTAAAAGACGGCGATGAAATTATGGCTATTAACCAAGAACCTGTGGAAAATTGGGCACAAGTT
AGCCAAATTATTCAAGCCAATCCTGAGAAAGAATTACAGATTGAAGTCAAACGTGAGAATCAAACGCAAACCTTTACGGC
AGTGCCTAAAGCGATTGAAGCGGGAGAACAAAAAGTTGGACAACTAGGCATACAAGCACCATTAAAAACGGGCTTTTTCG
ATAAAATCATCGGTGGTTTTCAAGAAAGTATTGCAGCGTTCTTCCGAATAATTGATGCTTTACGCTCACTATTAACAAAC
TTTAGTATCGATCAATTAGGAGGGCCGGTTGCTATCTTCCAACTATCATCAGAAGCCGCAAAACAAGGACCAATGACGGT
GCTCATGATGACAGCGATGATTTCAATCAACTTAGGTATTTTCAACTTATTACCAATTCCCGGTTTAGATGGTGGGAAAT
TGCTGTTAAATATCATTGAAGGTGTTCGGGGGAAACCTTTAAGTCAAGAAAAAGAAGGAATCATTACATTAGTTGGTTTT
GGTTTATTGATGTTATTGATGGTTCTTGTGACTTGGAATGATATTCAGCGCTTTTTCTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-406)

PDZ domain (PDZ_6)

(207-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

52.225

100

0.531
  eeP Streptococcus thermophilus LMD-9

52.225

100

0.531