Detailed information NTG0796723

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: PYW36_RS05815
• Genome accession: NZ_CP118953
• Coordinates: 1186127..1187101 (+)
• Length: 324 a.a.
• NCBI ID: WP_103158616.1
• Uniprot ID: -
• Organism: Staphylococcus chromogenes strain DSM 20454
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1181127..1192101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PYW36_RS05780	rpmG	1181581..1181745 (+)	165	WP_255201399.1	50S ribosomal protein L33	-
PYW36_RS05785	-	1181941..1182480 (+)	540	WP_037573917.1	5-formyltetrahydrofolate cyclo-ligase	-
PYW36_RS05790	-	1182498..1183937 (+)	1440	WP_037573914.1	rhomboid family intramembrane serine protease	-
PYW36_RS05795	-	1183939..1184142 (+)	204	WP_037573910.1	YqgQ family protein	-
PYW36_RS05800	-	1184139..1185125 (+)	987	WP_037573907.1	ROK family glucokinase	-
PYW36_RS05805	-	1185126..1185437 (+)	312	WP_037573905.1	MTH1187 family thiamine-binding protein	-
PYW36_RS05810	-	1185451..1186074 (+)	624	WP_037573902.1	MBL fold metallo-hydrolase	-
PYW36_RS05815	comGA	1186127..1187101 (+)	975	WP_103158616.1	competence type IV pilus ATPase ComGA	Machinery gene
PYW36_RS05820	comGB	1187070..1188137 (+)	1068	WP_103158615.1	competence type IV pilus assembly protein ComGB	-
PYW36_RS05825	comGC	1188152..1188469 (+)	318	WP_037573894.1	competence type IV pilus major pilin ComGC	Machinery gene
PYW36_RS05830	comGD	1188459..1188890 (+)	432	WP_051604961.1	competence type IV pilus minor pilin ComGD	-
PYW36_RS05835	-	1188995..1189177 (+)	183	WP_133172104.1	hypothetical protein	-
PYW36_RS05840	-	1189194..1189568 (+)	375	WP_107374195.1	competence type IV pilus minor pilin ComGF	-
PYW36_RS05845	-	1189733..1190257 (+)	525	WP_103159095.1	shikimate kinase	-
PYW36_RS05850	gcvT	1190410..1191501 (+)	1092	WP_103159094.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37099.88 Da
• Isoelectric Point: 7.4356

>NTDB_id=796723 PYW36_RS05815 WP_103158616.1 1186127..1187101(+) (comGA) [Staphylococcus chromogenes strain DSM 20454]
MQLLLDHVLQYAITHDASDVHFIPTASQVDVKLRIKDNLKTFDTLNLETYQRILTLLKFKSGLDVSSRHRAQSGRYIYEY
QELYYLRVSTLPLNLGTESCVIRITPQIFQTDKLQTTNDIRKIMEKKQGLILFSGPTGAGKSTLMYQMVVYAKEILNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDKQIAKEVTQASLSGHLVLPTIHANDCQGVLL
RLIEMGITKQDLIQSLNMIVNQRLITTKNNDRRLVYETMTSLDIQYFLNHNFTLPDSFKSLSEKLYDLQKEGEIDEQTLR
KYKK

Nucleotide

• Length: 975 bp

>NTDB_id=796723 PYW36_RS05815 WP_103158616.1 1186127..1187101(+) (comGA) [Staphylococcus chromogenes strain DSM 20454]
ATGCAGTTATTATTAGACCATGTATTACAGTATGCCATAACCCATGACGCTTCAGATGTCCACTTTATTCCAACCGCTTC
CCAAGTTGATGTAAAATTGAGAATAAAAGATAACTTAAAGACATTTGACACTCTGAATCTAGAGACATACCAAAGAATTT
TAACTTTACTCAAGTTCAAATCAGGTTTAGATGTTTCTTCACGCCATAGAGCTCAAAGTGGGCGATACATCTATGAGTAC
CAAGAACTGTATTATTTGCGTGTTTCTACATTACCACTAAACTTGGGCACTGAAAGTTGTGTAATAAGAATAACGCCGCA
AATATTTCAGACAGACAAACTTCAAACCACTAACGACATTCGTAAAATAATGGAGAAAAAACAAGGACTCATCTTATTTA
GTGGCCCAACAGGAGCTGGTAAAAGTACACTCATGTATCAAATGGTCGTTTATGCTAAAGAAATATTAAATTTAAATATT
ATTACTATAGAAGACCCTGTAGAGCAGCTCGTTAATGGCATTACTCAAATTTCTGTAAATGAAAAAGCAGACATCACATA
TGGTAGTTCTCTTAAAGCTATTTTACGTTGTGATCCTGATGTTATATTAATCGGGGAGATACGAGACAAACAAATTGCCA
AAGAAGTGACGCAAGCAAGTTTAAGTGGACATCTCGTCTTGCCAACGATTCATGCGAATGATTGTCAAGGTGTCTTATTA
AGACTCATTGAAATGGGCATTACCAAACAAGATTTAATACAATCATTAAATATGATCGTTAATCAAAGACTAATCACAAC
TAAAAACAACGATAGAAGATTAGTCTATGAAACCATGACAAGTTTAGACATTCAATACTTTCTAAACCACAATTTTACAT
TGCCAGATTCATTTAAAAGTTTAAGTGAAAAACTTTATGACTTACAAAAGGAAGGGGAGATTGATGAACAAACTTTACGA
AAGTATAAAAAATAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.204	99.691	0.58
comGA	Staphylococcus aureus N315	58.204	99.691	0.58