Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | PX335_RS08620 | Genome accession | NZ_CP118933 |
| Coordinates | 1798464..1798844 (+) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain ML4 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1793464..1803844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PX335_RS08590 (PX335_08590) | kdsB | 1794370..1795131 (+) | 762 | WP_017386826.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| PX335_RS08595 (PX335_08595) | holB | 1795145..1796125 (+) | 981 | WP_017386827.1 | DNA polymerase III subunit delta' | - |
| PX335_RS08600 (PX335_08600) | pilZ | 1796136..1796477 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| PX335_RS08605 (PX335_08605) | ycfH | 1796495..1797268 (+) | 774 | WP_017386828.1 | TatD family hydrolase | - |
| PX335_RS08610 (PX335_08610) | - | 1797305..1797913 (+) | 609 | WP_014206595.1 | TetR/AcrR family transcriptional regulator | - |
| PX335_RS08615 (PX335_08615) | - | 1797920..1798474 (+) | 555 | WP_002121405.1 | type II secretion system protein | - |
| PX335_RS08620 (PX335_08620) | xcpV | 1798464..1798844 (+) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| PX335_RS08625 (PX335_08625) | xcpW | 1798844..1799599 (+) | 756 | WP_017386829.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| PX335_RS08630 (PX335_08630) | gspK | 1799600..1800559 (+) | 960 | WP_017386830.1 | type II secretion system minor pseudopilin GspK | - |
| PX335_RS08635 (PX335_08635) | - | 1800788..1801384 (+) | 597 | WP_057073603.1 | 6-carboxytetrahydropterin synthase | - |
| PX335_RS08640 (PX335_08640) | ung | 1801438..1802151 (+) | 714 | WP_005069527.1 | uracil-DNA glycosylase | - |
| PX335_RS08645 (PX335_08645) | hibch | 1802148..1803272 (+) | 1125 | WP_014206599.1 | enoyl-CoA hydratase/isomerase family protein | - |
| PX335_RS08650 (PX335_08650) | tadA | 1803278..1803781 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=796505 PX335_RS08620 WP_002121425.1 1798464..1798844(+) (xcpV) [Acinetobacter pittii strain ML4]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=796505 PX335_RS08620 WP_002121425.1 1798464..1798844(+) (xcpV) [Acinetobacter pittii strain ML4]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTTGATTTGCAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTGTTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTAGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACCAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTTGATTTGCAAATTAGCTTATATGATTCTGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTGTTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |