Detailed information NTG0796506

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: PX335_RS08625
• Genome accession: NZ_CP118933
• Coordinates: 1798844..1799599 (+)
• Length: 251 a.a.
• NCBI ID: WP_017386829.1
• Uniprot ID: A0A1C2UFW7
• Organism: Acinetobacter pittii strain ML4
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1793844..1804599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PX335_RS08590 (PX335_08590)	kdsB	1794370..1795131 (+)	762	WP_017386826.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PX335_RS08595 (PX335_08595)	holB	1795145..1796125 (+)	981	WP_017386827.1	DNA polymerase III subunit delta'	-
PX335_RS08600 (PX335_08600)	pilZ	1796136..1796477 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
PX335_RS08605 (PX335_08605)	ycfH	1796495..1797268 (+)	774	WP_017386828.1	TatD family hydrolase	-
PX335_RS08610 (PX335_08610)	-	1797305..1797913 (+)	609	WP_014206595.1	TetR/AcrR family transcriptional regulator	-
PX335_RS08615 (PX335_08615)	-	1797920..1798474 (+)	555	WP_002121405.1	type II secretion system protein	-
PX335_RS08620 (PX335_08620)	xcpV	1798464..1798844 (+)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
PX335_RS08625 (PX335_08625)	xcpW	1798844..1799599 (+)	756	WP_017386829.1	type II secretion system minor pseudopilin GspJ	Machinery gene
PX335_RS08630 (PX335_08630)	gspK	1799600..1800559 (+)	960	WP_017386830.1	type II secretion system minor pseudopilin GspK	-
PX335_RS08635 (PX335_08635)	-	1800788..1801384 (+)	597	WP_057073603.1	6-carboxytetrahydropterin synthase	-
PX335_RS08640 (PX335_08640)	ung	1801438..1802151 (+)	714	WP_005069527.1	uracil-DNA glycosylase	-
PX335_RS08645 (PX335_08645)	hibch	1802148..1803272 (+)	1125	WP_014206599.1	enoyl-CoA hydratase/isomerase family protein	-
PX335_RS08650 (PX335_08650)	tadA	1803278..1803781 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
PX335_RS08655 (PX335_08655)	-	1803852..1804292 (+)	441	WP_017386832.1	SRPBCC family protein	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28862.11 Da
• Isoelectric Point: 9.5667

>NTDB_id=796506 PX335_RS08625 WP_017386829.1 1798844..1799599(+) (xcpW) [Acinetobacter pittii strain ML4]
MIKNKCFRYSSTASRLAARSEQMMRGYSEQSSSSCAQTKLRFVNPRSGFTLVELLVSIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVIKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGDQ

Nucleotide

• Length: 756 bp

>NTDB_id=796506 PX335_RS08625 WP_017386829.1 1798844..1799599(+) (xcpW) [Acinetobacter pittii strain ML4]
ATGATAAAGAATAAATGTTTTCGCTATTCAAGCACCGCTTCACGTCTTGCGGCACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTTCAATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAAATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAATAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGACTTATCGCTCTCCAAACAGGGAGATCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

3D structure

• AlphaFold DB: A0A1C2UFW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	79.6	99.602	0.793