Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | PXI10_RS06945 | Genome accession | NZ_CP118900 |
| Coordinates | 1304606..1304908 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BDS5 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1299606..1309908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXI10_RS06920 (PXI10_06920) | rpsR | 1299969..1300229 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| PXI10_RS06925 (PXI10_06925) | lon | 1300289..1302664 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| PXI10_RS06930 (PXI10_06930) | - | 1302681..1303328 (-) | 648 | WP_011049880.1 | outer membrane protein assembly factor BamD | - |
| PXI10_RS06935 (PXI10_06935) | fliW | 1303489..1303878 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| PXI10_RS06940 (PXI10_06940) | proC | 1303878..1304609 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| PXI10_RS06945 (PXI10_06945) | ctsT | 1304606..1304908 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| PXI10_RS06950 (PXI10_06950) | - | 1304905..1305567 (+) | 663 | WP_057100537.1 | hypothetical protein | - |
| PXI10_RS06955 (PXI10_06955) | - | 1305564..1306016 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| PXI10_RS06960 (PXI10_06960) | hemD | 1306013..1306642 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| PXI10_RS06965 (PXI10_06965) | thiE | 1306620..1307252 (-) | 633 | WP_070309060.1 | thiamine phosphate synthase | - |
| PXI10_RS06970 (PXI10_06970) | thiD | 1307242..1308054 (-) | 813 | WP_070309058.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| PXI10_RS06975 (PXI10_06975) | - | 1308051..1308737 (-) | 687 | WP_070309056.1 | endonuclease III domain-containing protein | - |
| PXI10_RS06980 (PXI10_06980) | - | 1308734..1309495 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=796136 PXI10_RS06945 WP_002853046.1 1304606..1304908(+) (ctsT) [Campylobacter jejuni strain BDS5]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=796136 PXI10_RS06945 WP_002853046.1 1304606..1304908(+) (ctsT) [Campylobacter jejuni strain BDS5]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |