Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   PYV58_RS03625 Genome accession   NZ_CP118892
Coordinates   761800..766326 (+) Length   1508 a.a.
NCBI ID   WP_034615978.1    Uniprot ID   A0AAX3PMP0
Organism   Acinetobacter sp. TAC-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 756800..771326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PYV58_RS03600 (PYV58_03600) - 757299..757940 (-) 642 WP_004723804.1 hypothetical protein -
  PYV58_RS03605 (PYV58_03605) pilG 758225..758608 (+) 384 WP_004723803.1 twitching motility response regulator PilG Regulator
  PYV58_RS03610 (PYV58_03610) - 758634..759002 (+) 369 WP_004723801.1 response regulator -
  PYV58_RS03615 (PYV58_03615) - 759006..759542 (+) 537 WP_004723799.1 chemotaxis protein CheW -
  PYV58_RS03620 (PYV58_03620) - 759585..761654 (+) 2070 WP_004817697.1 methyl-accepting chemotaxis protein -
  PYV58_RS03625 (PYV58_03625) chpA 761800..766326 (+) 4527 WP_034615978.1 Hpt domain-containing protein Regulator
  PYV58_RS03630 (PYV58_03630) - 766335..766799 (+) 465 WP_004723795.1 hypothetical protein -
  PYV58_RS03635 (PYV58_03635) dapE 766875..768008 (-) 1134 WP_004723792.1 succinyl-diaminopimelate desuccinylase -
  PYV58_RS03640 (PYV58_03640) - 768165..768305 (-) 141 WP_004723791.1 entericidin A/B family lipoprotein -
  PYV58_RS03645 (PYV58_03645) - 768421..769266 (-) 846 WP_034615975.1 DUF1853 family protein -
  PYV58_RS03650 (PYV58_03650) - 769493..769891 (+) 399 WP_004723787.1 YbaN family protein -

Sequence


Protein


Download         Length: 1508 a.a.        Molecular weight: 170334.53 Da        Isoelectric Point: 4.4529

>NTDB_id=796100 PYV58_RS03625 WP_034615978.1 761800..766326(+) (chpA) [Acinetobacter sp. TAC-1]
MKEILKHLVEHVTLPEDAYLGQDEEILEIFVEELEEIFEQLQTSLDRWQLEEFKDTELVNIRRYFHTLKGSGRMVGAKRS
GELAWTVEDTLNRIITKNLELTSEIQHYVSAVFNIYKFKLYSEFLNRKPHHLDLAPLVYLGQQLQQKQSLEPALDELLAL
SNTLDNENVITGLEIGEDTATAAGTSVTTPHVVDLVADSSTDTTEEEVVVESTVADDSLTSETLEIFVEESEEHLAAIKE
FLHLEEHTPDQYNRLIRALHTLRGSSSMAHVNEVFEASGKVEHLFKVLVQEDTESSKNENALLTYYAEFVSDYLYVLKLK
GNQAVELQTIYQKFNDAWERYDFQHQYQHSQTGLVTQLVDLEIDLLLDAEFEFDKRAQVEYPAYFQQLAQQAQMLIDHTN
NRAAQGIHDFSLALKDGYEQVIRKPDLLNTDYAFEMFSKAHQEFIHLFDTLASGQRVSLNESTQAILAELHDYLHQEIDT
GVAGQIVETRTALDTEQQPDTLSIAANPVESVGNYVLTQINLDKQNIDSEHSQREFDADVLDIFIEEADELLVGMDHDLN
TWSSHPDDTTALNNLMRYLHTLKGGANMVQATHIGLIAHELETIYERVIKGQLKAEPHIIQAIRLIQDDVADRIQLIREK
SIDYPATHILSVLHNIDQQGPIEAVQASTAVEPQFSHDAVDLHELEYVVDDIVLAIDQTPELLETEPLDQDQRPAIDDAQ
LFIDANQDTGLDPVEVVARETFIEEARELIDDGLSILSQWFDQRSNRSFLLQLQRIAHSLKGGAKMVKLEEVADIAYELE
NAFEQFGLHNFNSNVYDGLLEKTFHWLDAAIFKHHYDNFEGLKSSLHGIEYVDVSAQLPEKLSRTNLIFEQSISEFVQGD
GTEPPSMLGEWDLSQKTESNNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLTDMELAIQRLADQLRRMEGEL
ESQIIAKHGDLSARYADFDPLEMDQYSSLNQLSKSLAESASDLVDFKTTLAEKIRDTEGLLLQQSRIQAEIQESLMRTRL
VPFSRLLPRLQRLVRQTSSTVNKPTELLVNNTEGELDRNILEKLVSPLEHMLRNAIDHGIEDAEQRQKSGKALTGRIDLN
ISRQGTDVLVSFKDDGKGIDPKVIRDKAIEKGLIKTDQQLEPEEILQFIFHPGFSTAQQVTQISGRGVGLDVVQSEIKSL
GGQVSVSSELGHGSTFTITVPTTVAVSDALMVKVGDQQFAVPLSQIDRIVRISPAALEEYFETQNDYFDIDFQSYKLRYL
GEFTSNQVTPRLHGLAHSLPVLLIKGSLGQSIAILVDQLIGSRSQIVVKPIGKQFATINAIAGATILGDGQVCLILDGQN
IARQVQASTRGGAEHLQHDKQRHRDQRRLIMIVDDSVTVRKVTSRLLERQGFDVITAKDGVDAIEQLENVKPDLMLLDIE
MPRMDGFEVTNLVRHHEIHRDLPIIMITSRTGEKHRERAFSLGVTNYMGKPFQEADLLENIEALLTVK

Nucleotide


Download         Length: 4527 bp        

>NTDB_id=796100 PYV58_RS03625 WP_034615978.1 761800..766326(+) (chpA) [Acinetobacter sp. TAC-1]
ATGAAAGAAATATTAAAACATTTAGTGGAACACGTTACTTTACCTGAAGATGCGTATCTTGGTCAGGATGAGGAAATTTT
AGAAATTTTTGTAGAAGAACTTGAAGAAATTTTTGAACAGCTACAAACCTCTCTTGATCGATGGCAACTCGAAGAGTTTA
AAGATACCGAATTGGTCAATATTCGCCGTTATTTTCATACGCTTAAGGGGTCTGGGCGTATGGTGGGGGCTAAACGTTCT
GGTGAACTTGCTTGGACTGTTGAAGATACATTAAATCGTATTATTACGAAAAATCTGGAACTTACTTCCGAGATTCAACA
CTATGTAAGTGCAGTATTTAATATTTATAAGTTCAAACTCTATTCAGAGTTTTTAAATCGAAAACCGCATCATTTAGATT
TAGCACCTTTGGTGTATTTGGGGCAACAGCTACAACAGAAACAAAGCTTAGAACCTGCTTTAGACGAGTTATTGGCATTA
TCAAATACACTGGATAATGAAAATGTCATTACTGGTTTGGAGATTGGTGAAGATACTGCAACAGCAGCAGGAACCTCTGT
GACCACTCCGCATGTGGTTGATCTCGTTGCAGATAGCTCTACAGATACGACTGAAGAAGAAGTGGTAGTTGAATCGACTG
TTGCAGATGATAGTTTAACCTCTGAAACCTTGGAAATCTTTGTTGAAGAGTCAGAGGAGCATCTGGCGGCAATTAAAGAA
TTTTTGCACTTAGAAGAACATACGCCTGATCAATATAATCGCTTGATTCGTGCCTTGCATACTTTGCGTGGCAGTTCTTC
AATGGCGCATGTCAATGAGGTCTTTGAAGCAAGTGGTAAGGTCGAGCATTTATTTAAAGTATTGGTTCAAGAAGATACCG
AGTCCTCAAAAAATGAAAATGCGCTACTGACTTACTATGCTGAATTTGTCAGTGATTATCTCTATGTTTTAAAGCTGAAA
GGTAATCAAGCTGTTGAGCTACAAACCATTTATCAAAAATTTAATGATGCTTGGGAACGCTATGATTTCCAACATCAATA
TCAACATTCGCAAACTGGTTTAGTCACACAATTGGTTGATCTTGAGATCGATCTATTGCTTGATGCCGAGTTTGAGTTTG
ATAAACGCGCCCAAGTTGAATATCCAGCATATTTCCAACAACTGGCTCAACAAGCGCAGATGTTGATAGATCATACTAAT
AATCGTGCTGCACAAGGCATTCATGATTTTAGTCTTGCTTTAAAAGATGGTTATGAACAAGTTATTCGCAAGCCAGATTT
ATTAAATACTGATTATGCTTTTGAAATGTTTTCTAAGGCCCATCAGGAATTTATTCATTTATTCGATACTTTGGCCTCAG
GACAAAGAGTCAGCCTTAATGAATCAACACAAGCGATTTTGGCTGAGTTACATGACTATTTACACCAAGAAATAGACACT
GGTGTTGCTGGTCAAATTGTTGAAACAAGGACTGCGCTAGACACTGAACAGCAGCCAGATACACTCTCAATTGCAGCGAA
CCCTGTTGAATCAGTAGGGAACTATGTACTGACGCAAATTAATCTGGATAAACAGAATATTGACTCAGAACATAGTCAAC
GTGAATTTGATGCTGATGTTCTCGACATTTTTATTGAAGAAGCCGACGAATTGTTGGTTGGAATGGACCATGACTTAAAT
ACTTGGTCAAGCCATCCTGATGACACAACCGCGTTAAACAATTTGATGCGTTATTTGCATACCTTAAAAGGTGGTGCAAA
TATGGTGCAAGCCACCCATATTGGTTTGATTGCGCATGAGTTGGAAACCATTTATGAACGCGTGATTAAAGGTCAACTCA
AAGCAGAACCACACATTATTCAAGCGATTCGTTTAATTCAAGATGATGTGGCAGATCGTATTCAATTGATCCGTGAAAAA
TCAATTGATTATCCAGCTACTCATATTCTCAGTGTTTTACACAATATTGATCAGCAAGGTCCGATTGAAGCTGTTCAAGC
ATCAACTGCGGTTGAGCCACAATTTAGTCATGATGCAGTAGATTTGCATGAACTTGAATATGTTGTAGATGATATCGTTT
TAGCGATTGATCAAACTCCAGAACTGCTTGAAACTGAACCGTTGGATCAAGATCAACGACCTGCAATTGATGATGCTCAA
TTATTTATAGATGCAAATCAAGATACAGGTTTAGATCCTGTTGAAGTTGTTGCTCGAGAAACCTTTATTGAAGAAGCACG
AGAGCTGATTGATGATGGTTTGAGCATTTTATCTCAATGGTTTGATCAGCGTAGCAACCGTAGTTTCCTACTCCAATTAC
AACGTATTGCACACAGCTTAAAAGGCGGTGCAAAAATGGTGAAATTGGAAGAAGTGGCTGATATTGCATATGAATTAGAA
AATGCATTTGAGCAATTTGGTTTACATAATTTTAACTCGAATGTTTATGATGGTTTATTGGAAAAAACCTTTCACTGGCT
AGATGCTGCAATCTTTAAACATCACTATGATAATTTTGAAGGCTTAAAGTCGAGTTTACATGGCATTGAATATGTTGATG
TTTCTGCACAGCTTCCAGAAAAATTATCTCGAACAAATTTAATCTTTGAGCAATCGATCAGTGAGTTTGTTCAGGGGGAT
GGTACTGAGCCACCGTCAATGCTGGGTGAATGGGATCTTTCACAAAAAACTGAATCCAACAATGAGATGATTCGTATCTC
TGCGGATTTGGTTGAAAAAATGATTGACCTTTCTGGTGAAAACGCGATCAACCGTTCACGTATTGAGATGGATTTGGGGC
AGTTAGGGAATACCTTGACTGATATGGAGTTGGCTATTCAACGTTTGGCTGATCAGCTACGCCGTATGGAAGGTGAGTTA
GAAAGCCAAATTATTGCAAAACATGGTGATTTAAGCGCTCGCTATGCAGATTTTGACCCTTTAGAAATGGACCAATATTC
ATCTCTAAACCAGTTATCAAAATCGTTGGCTGAATCTGCATCTGACTTGGTTGATTTTAAGACCACGTTGGCTGAAAAGA
TTCGTGATACTGAAGGTTTATTGCTTCAGCAATCTCGTATTCAAGCTGAAATTCAGGAAAGCTTGATGCGTACTCGTCTG
GTACCATTCTCAAGATTGTTGCCTCGATTACAGCGTTTGGTTCGTCAGACCTCTTCAACCGTGAATAAACCCACTGAGCT
TTTAGTCAATAATACTGAAGGGGAGTTGGATCGTAATATTCTGGAAAAATTAGTTTCACCGTTAGAGCATATGTTGCGTA
ATGCGATTGACCACGGGATTGAAGATGCGGAACAGCGTCAGAAGTCGGGCAAAGCGTTGACAGGTCGAATTGATTTGAAT
ATTAGTCGTCAAGGTACAGATGTGCTTGTATCGTTTAAAGATGATGGTAAAGGAATTGATCCAAAAGTTATTCGTGATAA
AGCAATCGAAAAAGGCTTAATCAAAACTGATCAGCAGTTAGAGCCTGAGGAAATCCTACAGTTTATTTTCCATCCAGGTT
TTAGTACAGCACAGCAAGTGACACAAATCTCTGGTCGTGGTGTTGGCTTGGATGTTGTGCAAAGTGAAATTAAATCACTT
GGTGGACAAGTGAGTGTCAGTTCTGAGTTGGGGCATGGTTCAACCTTTACGATTACCGTACCTACAACAGTTGCGGTCAG
CGATGCCTTGATGGTGAAAGTCGGTGATCAGCAATTTGCAGTCCCATTATCGCAAATTGATCGTATTGTTCGAATTTCAC
CAGCCGCTTTGGAAGAATATTTTGAAACTCAAAATGACTATTTTGATATCGATTTCCAAAGCTATAAGCTACGTTATTTA
GGTGAGTTTACCTCGAATCAAGTCACTCCACGGTTACATGGACTTGCACATTCATTACCAGTGTTGTTGATCAAGGGAAG
CTTGGGGCAATCCATTGCCATTCTGGTTGATCAGTTAATTGGTTCACGTTCACAAATTGTGGTTAAACCGATTGGTAAGC
AGTTTGCTACCATCAATGCGATTGCGGGTGCAACCATTCTGGGTGATGGTCAGGTGTGTTTGATTTTGGATGGACAAAAT
ATTGCACGACAAGTTCAAGCATCTACCCGAGGTGGCGCTGAACATCTTCAACATGATAAACAACGTCATCGTGATCAACG
CCGTTTGATTATGATCGTGGATGACTCAGTTACCGTTCGTAAGGTCACTTCACGTTTGCTTGAACGCCAAGGTTTCGATG
TGATTACTGCGAAAGATGGTGTGGATGCGATTGAGCAACTTGAAAATGTCAAACCAGACTTGATGTTGCTGGATATTGAA
ATGCCTCGAATGGATGGTTTTGAAGTCACCAACTTGGTTCGCCATCATGAAATTCACCGCGATTTGCCAATCATCATGAT
TACGTCACGAACAGGTGAAAAACATCGTGAACGGGCATTTAGCTTAGGTGTGACAAATTATATGGGTAAACCATTCCAAG
AAGCTGATTTATTGGAAAATATTGAAGCTTTGTTGACGGTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

58.847

100

0.595