Detailed information NTG0795078

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PWO55_RS16910
• Genome accession: NZ_CP118770
• Coordinates: 3385170..3386333 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain IMD4036
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3380170..3391333

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PWO55_RS16880 (PWO55_16840)	-	3380433..3380859 (-)	427	Protein_3288	TIGR03826 family flagellar region protein	-
PWO55_RS16885 (PWO55_16845)	comFC	3380928..3381617 (-)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
PWO55_RS16890 (PWO55_16850)	-	3381623..3381907 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
PWO55_RS16895 (PWO55_16855)	comFA	3381965..3383350 (-)	1386	WP_046560106.1	DEAD/DEAH box helicase	Machinery gene
PWO55_RS16900 (PWO55_16860)	-	3383458..3384306 (-)	849	WP_044052857.1	DegV family protein	-
PWO55_RS16905 (PWO55_16865)	degU	3384404..3385093 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PWO55_RS16910 (PWO55_16870)	degS	3385170..3386333 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
PWO55_RS16915 (PWO55_16875)	-	3386555..3387202 (+)	648	WP_003151384.1	YigZ family protein	-
PWO55_RS16920 (PWO55_16880)	-	3387207..3388421 (+)	1215	WP_003151383.1	LCP family protein	-
PWO55_RS16925 (PWO55_16885)	-	3388511..3389587 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
PWO55_RS16930 (PWO55_16890)	tuaH	3389720..3390916 (-)	1197	WP_079004918.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=795078 PWO55_RS16910 WP_003151385.1 3385170..3386333(-) (degS) [Bacillus velezensis strain IMD4036]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=795078 PWO55_RS16910 WP_003151385.1 3385170..3386333(-) (degS) [Bacillus velezensis strain IMD4036]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGTTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948