Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PWO93_RS08415 Genome accession   NZ_CP118745
Coordinates   1829862..1831139 (-) Length   425 a.a.
NCBI ID   WP_021730799.1    Uniprot ID   -
Organism   Lactiplantibacillus paraplantarum strain FL-8     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1824862..1836139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWO93_RS08410 (PWO93_08410) - 1828113..1829822 (-) 1710 WP_260352315.1 proline--tRNA ligase -
  PWO93_RS08415 (PWO93_08415) eeP 1829862..1831139 (-) 1278 WP_021730799.1 RIP metalloprotease RseP Regulator
  PWO93_RS08420 (PWO93_08420) - 1831177..1831962 (-) 786 WP_131509952.1 phosphatidate cytidylyltransferase -
  PWO93_RS08425 (PWO93_08425) - 1831978..1832757 (-) 780 WP_021730797.1 isoprenyl transferase -
  PWO93_RS08430 (PWO93_08430) frr 1832877..1833440 (-) 564 WP_021730796.1 ribosome recycling factor -
  PWO93_RS08435 (PWO93_08435) pyrH 1833442..1834164 (-) 723 WP_021730795.1 UMP kinase -
  PWO93_RS08440 (PWO93_08440) tsf 1834364..1835242 (-) 879 WP_021730794.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 45969.55 Da        Isoelectric Point: 9.9189

>NTDB_id=794947 PWO93_RS08415 WP_021730799.1 1829862..1831139(-) (eeP) [Lactiplantibacillus paraplantarum strain FL-8]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQVGQDGIVHSINASKKTTLFNGIPLSVTATDLEKELWIEGYENGDETEVKRYSVDHDATIVESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTHVAATTAHSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQQLKLTIKRAGQTKKIAVTPAAKTVSGNRIGQIGVQWATKTDTSLGAKLAYGFTGSWGITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=794947 PWO93_RS08415 WP_021730799.1 1829862..1831139(-) (eeP) [Lactiplantibacillus paraplantarum strain FL-8]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGTATCTTGGTCATCGTCCATGAGTTTGGGCACTTTTACTTCGC
CAAAAAGGCTGGGATTTTAGTGCGTGAATTTTCTGTCGGGATGGGGCCCAAGGCGGTCGCGTTTCGTCGTAATGCCACGA
CCTATACGTTACGGTTTTTACCAATTGGGGGCTACGTGCGGATGGCAGGTGTCGCCGATGATGAGGATGAAGAACTCAAA
CCAGGGACACCAGTAAGCTTGCAAGTCGGTCAGGATGGGATTGTTCATTCGATCAATGCTAGTAAAAAAACAACGTTGTT
CAATGGAATTCCGCTATCGGTAACGGCCACTGATCTAGAAAAAGAACTCTGGATCGAAGGTTACGAAAATGGTGACGAAA
CTGAAGTGAAACGATATTCTGTCGATCATGATGCGACCATTGTGGAAAGTGACGGGACTGAAGTTCAAATTGCCCCGGTC
GACGTTCAGTTTCAATCGGCCAAACTTTGGCAACGTATGTTGACCAATTTTGCTGGTCCGATGAATAATTTCATTCTGGC
CATCATTACCTTTGCCATTTTAGCTTTTATGCAAGGGGGGGTCACCAGTACGACGACCCACGTTGCAGCGACAACGGCTC
ACTCAGTCGCACGACAAGCTGGCATTCAAAAGGGTGATCAGATTGTGGCCGTAAATGGTAAAAAAATGACGAGTGCGCAA
TCAATTTCGTTATTGATTCAGGACAGCCCCAAGCAACAATTAAAGTTGACCATCAAACGGGCGGGACAGACTAAAAAAAT
TGCAGTCACGCCCGCTGCAAAGACGGTTTCTGGTAATCGAATCGGTCAAATTGGGGTCCAATGGGCCACTAAGACGGATA
CGAGTCTAGGTGCTAAGTTGGCATATGGGTTTACTGGCTCGTGGGGAATCACGAAGCAGATTTTTCAAGTGCTCGGGCGG
ATGGTTACCCATGGTTTTAGTTTGAATGATTTAGGGGGGCCCGTGGCAATCTTTGCAACGACTTCTCAAGCGGCTAAATC
TGGTGTGCGCACTGTGATTTACTTGCTGGCTGTGTTATCGATCAACCTCGGAATTGTCAATTTATTGCCAATTCCAGCCC
TTGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGAGGTAAGCCACTGCGAGTGGAAACGGAAAGTGTTATT
ACCTTGATTGGATTTGGCCTTTTGATGTTATTAATGATTCTAGTAACTTGGAATGATATTCAACGGTATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(211-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494
  eeP Streptococcus thermophilus LMG 18311

49.065

100

0.494