Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PW252_RS09985 Genome accession   NZ_CP118735
Coordinates   2060510..2061769 (-) Length   419 a.a.
NCBI ID   WP_248049469.1    Uniprot ID   A0AA96VMT1
Organism   Streptococcus iners strain 29887     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2055510..2066769
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PW252_RS09975 (PW252_09975) gdhA 2056670..2058016 (+) 1347 WP_248049471.1 NADP-specific glutamate dehydrogenase -
  PW252_RS09980 (PW252_09980) - 2058173..2060026 (-) 1854 WP_248049470.1 proline--tRNA ligase -
  PW252_RS09985 (PW252_09985) eeP 2060510..2061769 (-) 1260 WP_248049469.1 RIP metalloprotease RseP Regulator
  PW252_RS09990 (PW252_09990) - 2061779..2062573 (-) 795 WP_248049495.1 phosphatidate cytidylyltransferase -
  PW252_RS09995 (PW252_09995) - 2062595..2063350 (-) 756 WP_172090902.1 isoprenyl transferase -
  PW252_RS10000 (PW252_10000) yajC 2063509..2063829 (-) 321 WP_248049468.1 preprotein translocase subunit YajC -
  PW252_RS10005 (PW252_10005) - 2063940..2065232 (-) 1293 WP_029187714.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 419 a.a.        Molecular weight: 45107.31 Da        Isoelectric Point: 4.8759

>NTDB_id=794755 PW252_RS09985 WP_248049469.1 2060510..2061769(-) (eeP) [Streptococcus iners strain 29887]
MKGILAFIFIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGEDKTEIKT
GTPASLTLNADGVVTRINLSGKQLDNLSLPMNVTGFDFEEKLEITGLVLDENKTYKVDHDATIVEEDGTEVRIAPLDVQY
QNATVWGKLITNFAGPMNNFILGTFIFIMLVFAQGGVADPTSNAVRITDGGALQAAGLVTGDKILSINGQATDNYTEIAD
IISQAASEATTAPSFELVVEHEGAEKTITVTAEKAEDSYRIGVSPILKTGFFDKIVGGFQQAGGTALIVVTALKNLIANF
DVKQLGGPVAIYSVSNQAAANGWFSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETESYITLAGVA
IMVVLMLVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=794755 PW252_RS09985 WP_248049469.1 2060510..2061769(-) (eeP) [Streptococcus iners strain 29887]
ATGAAGGGAATTTTAGCCTTTATCTTTATATTTGGTGTGATTGTGGTTGTTCATGAATTTGGGCATTTCTACTTTGCCAA
AAAATCGGGAATCCTTGTCAGAGAATTTGCTATTGGTATGGGTCCTAAAATCTTTGCTCACATTGGTAAAGATGGGACGG
CTTATACTATTCGTATCCTTCCGCTCGGTGGCTATGTTCGTATGGCTGGTTGGGGAGAAGATAAGACAGAAATTAAGACG
GGGACGCCAGCTAGCCTGACCTTGAATGCAGATGGGGTTGTTACTCGTATCAATCTTTCCGGCAAACAACTTGATAATCT
GAGTTTACCTATGAACGTGACCGGTTTTGATTTTGAGGAAAAACTAGAAATCACAGGCTTGGTGTTAGATGAAAACAAGA
CTTACAAGGTTGACCACGATGCTACGATTGTAGAGGAAGATGGAACGGAAGTTCGGATTGCTCCGCTGGATGTTCAATAT
CAAAATGCGACTGTCTGGGGGAAGTTGATAACCAACTTTGCTGGTCCTATGAATAACTTTATTCTAGGTACCTTTATTTT
CATCATGCTTGTCTTTGCTCAGGGTGGTGTTGCAGATCCAACAAGTAATGCAGTCCGTATTACAGACGGCGGCGCTTTAC
AGGCAGCTGGTCTAGTGACTGGTGATAAGATTTTGTCTATCAATGGTCAAGCAACGGACAATTACACAGAGATTGCTGAC
ATCATCAGCCAGGCAGCTTCAGAAGCTACTACAGCTCCAAGTTTTGAGTTGGTCGTAGAGCATGAAGGAGCTGAAAAAAC
AATCACAGTGACCGCTGAAAAGGCTGAGGATAGTTACCGAATTGGCGTTTCACCCATTCTAAAAACAGGTTTCTTTGATA
AGATTGTTGGTGGTTTCCAGCAAGCAGGTGGGACAGCCCTTATTGTTGTGACTGCCTTGAAGAACTTGATTGCCAACTTT
GATGTCAAGCAGTTGGGAGGACCTGTCGCTATTTATTCTGTCAGCAATCAAGCTGCTGCAAATGGCTGGTTCTCAGTCTT
TAACCTGATGGCTATGCTGTCGATCAATATTGGTATTTTTAACCTTATCCCTATTCCAGCCTTGGACGGTGGTAAGATTG
TCATGAACATTCTAGAAGGCATTCGCAGAAAACCGCTCAAACCAGAAACAGAATCCTATATCACTCTGGCAGGAGTTGCT
ATTATGGTCGTCCTCATGCTGGTTGTGACTTGGAATGATATTATGCGTGTATTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-405)

PDZ domain (PDZ_6)

(209-249)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65

100

0.652
  eeP Streptococcus thermophilus LMD-9

64.762

100

0.649