Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   PW220_RS09115 Genome accession   NZ_CP118734
Coordinates   1823420..1824679 (-) Length   419 a.a.
NCBI ID   WP_248055540.1    Uniprot ID   A0AA97A0T1
Organism   Streptococcus iners subsp. hyiners strain 29892     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1818420..1829679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PW220_RS09090 (PW220_09095) dhaS 1818578..1819159 (-) 582 WP_105117298.1 dihydroxyacetone kinase transcriptional activator DhaS -
  PW220_RS09095 (PW220_09100) dhaK 1819303..1820292 (+) 990 WP_172002655.1 dihydroxyacetone kinase subunit DhaK -
  PW220_RS09100 (PW220_09105) dhaL 1820303..1820878 (+) 576 WP_248033088.1 dihydroxyacetone kinase subunit DhaL -
  PW220_RS09105 (PW220_09110) dhaM 1820875..1821249 (+) 375 WP_248055535.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  PW220_RS09110 (PW220_09115) - 1821295..1823148 (-) 1854 WP_248055539.1 proline--tRNA ligase -
  PW220_RS09115 (PW220_09120) eeP 1823420..1824679 (-) 1260 WP_248055540.1 RIP metalloprotease RseP Regulator
  PW220_RS09120 (PW220_09125) - 1824689..1825483 (-) 795 WP_248055874.1 phosphatidate cytidylyltransferase -
  PW220_RS09125 (PW220_09130) - 1825505..1826260 (-) 756 WP_248055541.1 isoprenyl transferase -
  PW220_RS09130 (PW220_09135) yajC 1826419..1826721 (-) 303 WP_248055875.1 preprotein translocase subunit YajC -
  PW220_RS09135 (PW220_09140) - 1826849..1828141 (-) 1293 WP_248055542.1 adenylosuccinate synthase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45066.32 Da        Isoelectric Point: 5.2360

>NTDB_id=794703 PW220_RS09115 WP_248055540.1 1823420..1824679(-) (eeP) [Streptococcus iners subsp. hyiners strain 29892]
MKGILAFIFIFGVIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGEDKTEIKT
GTPASLTLNADGVVTRINLSGKQLDNVSLPMNVTSFDFEEKLEITGLVLDESKTYKVDHDATIVEEDGTEVRIAPLDVQY
QHATVWGRLMTNFAGPMNNFILGTFIFIMLVFAQGGVADPTTNAVRVTDGGALQAAGIVTGDKILSINGQATDTYTEIAS
AISQSAAEATTAPSFELVVEHEGAEKTITVTAEKVEGSYRIGVSPILKTGFFDKIIGGFQQAGGTALIVVTALKNLIANF
DVKQLGGPVAIYSVSNQAAANGWFSVFNLMAMLSINIGIFNLIPIPALDGGKIVMNILEGIRRKPLKPETESYITLAGVA
IMVVLMLVVTWNDIMRVFF

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=794703 PW220_RS09115 WP_248055540.1 1823420..1824679(-) (eeP) [Streptococcus iners subsp. hyiners strain 29892]
ATGAAGGGAATTTTAGCCTTTATCTTTATATTTGGCGTGATTGTAGTTGTTCATGAATTTGGGCATTTCTACTTTGCCAA
AAAATCGGGTATCCTTGTCAGAGAATTTGCCATTGGTATGGGCCCTAAAATCTTTGCTCACATTGGTAAAGATGGGACGG
CTTATACTATTCGTATCCTTCCGCTCGGTGGCTATGTGCGCATGGCTGGTTGGGGTGAAGATAAGACGGAAATTAAGACG
GGGACGCCAGCTAGCCTGACCTTGAATGCTGATGGGGTTGTTACTCGTATCAATCTTTCTGGAAAACAGCTTGATAATGT
TAGCTTACCCATGAATGTGACTAGTTTTGATTTCGAGGAAAAGCTAGAAATCACAGGCTTGGTGTTAGATGAAAGCAAGA
CCTACAAGGTTGATCACGATGCTACGATTGTAGAGGAGGATGGAACGGAAGTTCGCATTGCTCCGCTGGATGTTCAATAC
CAGCATGCGACCGTTTGGGGTCGATTGATGACCAACTTTGCTGGTCCTATGAATAACTTTATTCTAGGTACCTTTATTTT
CATCATGCTTGTCTTTGCTCAGGGTGGGGTTGCTGACCCAACGACTAATGCGGTTCGTGTGACAGATGGAGGGGCTTTAC
AGGCTGCAGGCATCGTTACGGGTGATAAAATTTTGTCTATCAATGGTCAAGCAACGGATACTTATACGGAAATTGCTAGC
GCTATTAGTCAATCCGCAGCGGAAGCGACTACAGCTCCAAGTTTTGAGTTGGTCGTAGAGCATGAAGGAGCTGAAAAAAC
AATCACAGTGACCGCTGAAAAGGTTGAGGGTAGTTACCGAATTGGCGTTTCACCCATTCTAAAAACAGGTTTCTTTGATA
AGATTATTGGGGGATTCCAGCAAGCAGGTGGGACAGCCCTTATTGTTGTGACTGCCTTAAAGAACTTGATTGCAAACTTT
GATGTCAAGCAGTTGGGCGGACCTGTGGCTATTTATTCTGTCAGCAATCAAGCTGCTGCAAATGGCTGGTTCTCAGTTTT
TAACCTGATGGCTATGCTGTCAATCAATATCGGTATTTTCAATCTTATCCCTATTCCAGCCTTGGATGGTGGGAAGATTG
TCATGAACATTCTAGAAGGTATTCGCAGAAAACCACTTAAACCAGAAACGGAATCCTATATCACGCTGGCAGGAGTTGCC
ATTATGGTCGTTCTTATGCTAGTTGTGACCTGGAATGACATTATGCGTGTATTCTTCTAA

Domains


Predicted by InterproScan.

(206-250)

(6-405)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

65.476

100

0.656

  eeP Streptococcus thermophilus LMD-9

65.238

100

0.654