Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PXH68_RS09855 Genome accession   NZ_CP118733
Coordinates   2132046..2132804 (+) Length   252 a.a.
NCBI ID   WP_205030876.1    Uniprot ID   -
Organism   Streptococcus suivaginalis strain 29896     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2127046..2137804
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PXH68_RS09840 (PXH68_09825) - 2129450..2130124 (-) 675 WP_248028563.1 YoaK family protein -
  PXH68_RS09845 (PXH68_09830) rlmH 2130157..2130636 (-) 480 WP_172043794.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PXH68_RS09850 (PXH68_09835) htrA 2130785..2131984 (+) 1200 WP_248028570.1 S1C family serine protease Regulator
  PXH68_RS09855 (PXH68_09840) spo0J 2132046..2132804 (+) 759 WP_205030876.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 28821.16 Da        Isoelectric Point: 8.4220

>NTDB_id=794656 PXH68_RS09855 WP_205030876.1 2132046..2132804(+) (spo0J) [Streptococcus suivaginalis strain 29896]
MEELIYLSPTDIIPNPYQPRQQFDPDKLQELAQSIQMNGIIQPLIVRKSAIHGYELLAGERRLRASKLAGLETVPVIVKE
LTDKELLNQAIIENLQRSDLNPIEEAHSYQRLIERGMTHDDIAGQMGKSRPYISNILRLLQLSPASQEAVESGRLSQGHA
RLLIGLSEKEQQDWIETIEKQEMSVRKLESILAPRKKKGVAKQDLFKQEIENQLRKRFGTLVQIHQKANGQGKLSIHFSN
LEELERLINNLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=794656 PXH68_RS09855 WP_205030876.1 2132046..2132804(+) (spo0J) [Streptococcus suivaginalis strain 29896]
ATGGAAGAATTAATCTATCTATCTCCAACTGATATTATTCCCAATCCCTATCAACCACGCCAACAATTTGATCCTGACAA
GCTTCAGGAATTGGCCCAGTCTATTCAGATGAACGGGATTATTCAACCCTTGATTGTTCGAAAATCGGCTATCCATGGCT
ATGAATTGCTGGCTGGTGAAAGACGGTTGCGAGCAAGTAAACTAGCTGGCTTAGAGACAGTTCCTGTTATTGTCAAGGAG
CTGACAGATAAGGAGTTGCTCAATCAAGCCATTATCGAAAATCTCCAGCGCTCAGATCTCAATCCTATCGAGGAAGCCCA
TTCCTATCAACGGCTCATTGAGCGGGGTATGACCCATGACGATATTGCTGGACAAATGGGAAAATCACGGCCCTATATCA
GCAATATCCTCAGACTCTTGCAGCTCAGTCCAGCCAGTCAAGAAGCAGTCGAAAGTGGCAGGCTGAGCCAGGGACATGCT
CGACTTCTCATCGGATTGTCTGAAAAGGAGCAGCAAGACTGGATTGAGACAATTGAAAAACAGGAAATGAGTGTTCGAAA
ACTAGAAAGTATCTTGGCTCCTCGAAAGAAAAAAGGAGTAGCTAAACAAGATCTGTTCAAACAAGAAATCGAAAACCAAC
TGCGCAAGCGTTTTGGAACTCTGGTTCAGATTCACCAAAAAGCAAATGGGCAAGGAAAGCTATCCATCCACTTTTCAAAC
CTAGAAGAATTAGAAAGACTTATCAACAACTTAAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.755

100

0.54