Detailed information NTG0794625

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: PXH68_RS04370
• Genome accession: NZ_CP118733
• Coordinates: 939295..940515 (+)
• Length: 406 a.a.
• NCBI ID: WP_158454837.1
• Uniprot ID: A0AA96VDS2
• Organism: Streptococcus suivaginalis strain 29896
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 934295..945515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PXH68_RS04340 (PXH68_04340)	-	935258..935593 (+)	336	WP_248027955.1	hypothetical protein	-
PXH68_RS04345 (PXH68_04345)	-	935689..936648 (+)	960	WP_205030706.1	ROK family glucokinase	-
PXH68_RS04350 (PXH68_04350)	-	936767..937045 (+)	279	WP_158454827.1	hypothetical protein	-
PXH68_RS04355 (PXH68_04355)	-	937058..937360 (+)	303	WP_248027953.1	hypothetical protein	-
PXH68_RS04360 (PXH68_04360)	-	937413..938252 (+)	840	WP_248027951.1	thymidylate synthase	-
PXH68_RS04365 (PXH68_04365)	-	938586..939098 (+)	513	WP_248027949.1	dihydrofolate reductase	-
PXH68_RS04370 (PXH68_04370)	clpX	939295..940515 (+)	1221	WP_158454837.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
PXH68_RS04375 (PXH68_04375)	yihA	940562..941149 (+)	588	WP_248027947.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
PXH68_RS04380 (PXH68_04380)	rplJ	941393..941890 (+)	498	WP_158454841.1	50S ribosomal protein L10	-
PXH68_RS04385 (PXH68_04385)	rplL	941960..942325 (+)	366	WP_002936483.1	50S ribosomal protein L7/L12	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 45143.51 Da
• Isoelectric Point: 4.4992

>NTDB_id=794625 PXH68_RS04370 WP_158454837.1 939295..940515(+) (clpX) [Streptococcus suivaginalis strain 29896]
MAVQTEFIHCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLTDLADTPKPQELLNILNHYVIGQDRAKR
ALAVAVYNHYKRINFQDSRDEDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENILLK
LLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIHVDTKNIL
FIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEKESYMQHIISDDIQKFGIIPELIGRLPVFAALDQLTTEDLVRILTE
PKNALVKQYQTLLSYDDVELEFDQDALQAIAEKAIERKTGARGLRSIIEETMLDVMFEVPSQAEVKRVRITKEAVDGTDK
PLLETA

Nucleotide

• Length: 1221 bp

>NTDB_id=794625 PXH68_RS04370 WP_158454837.1 939295..940515(+) (clpX) [Streptococcus suivaginalis strain 29896]
ATGGCTGTACAAACAGAATTTATCCATTGTTCTTTCTGTGGGAAGAATCAAGAAGAAGTAAAGAAAATTATCGCAGGTAA
CAATGTATTTATCTGTAACGAGTGTGTGGAATTAGCACAAGAGATCATCCGAGAAGAACTAGCAGAAGAAGTGCTAACTG
ACTTGGCAGATACACCAAAACCCCAAGAGTTATTGAATATCTTGAATCACTATGTAATTGGTCAAGATCGTGCCAAGCGT
GCCTTGGCAGTAGCGGTCTACAACCATTACAAACGCATCAATTTCCAAGATAGCCGAGATGAAGATGATGTGGACTTACA
AAAATCCAATATTTTGATGATTGGTCCAACTGGATCAGGGAAAACCTTCTTGGCTCAAACCTTGGCCAAAAGTTTAAATG
TTCCCTTTGCCATTGCGGATGCAACAGCCTTAACAGAAGCAGGTTATGTTGGTGAAGACGTGGAAAACATCCTCTTAAAA
TTGCTTCAAGCCGCGGATTTCAACATTGACAGAGCTGAACGAGGCATTATCTATGTCGATGAAATCGATAAGATTGCTAA
AAAAGGTGAGAATGTTTCCATTACTCGTGATGTCTCAGGTGAAGGCGTTCAGCAGGCATTATTGAAAATCATCGAGGGAA
CAGTTGCTAGTGTACCTCCACAAGGTGGCCGTAAGCATCCAAATCAAGAAATGATTCATGTTGACACTAAGAATATTCTG
TTCATTGTCGGCGGTGCCTTCGATGGGATTGAAGAGATTGTGAAGCAGCGTTTAGGTGAAAAAATTATCGGATTCGGTCA
AAACAATCGTGCAATCGATGAGAAAGAATCTTACATGCAGCACATTATCTCAGATGATATTCAAAAATTCGGCATTATTC
CAGAATTGATCGGTCGCTTACCTGTCTTTGCTGCTCTCGATCAGTTGACCACTGAAGATTTGGTGCGCATTTTGACAGAA
CCTAAAAATGCCCTTGTGAAACAATATCAGACCCTTCTTTCTTACGATGATGTGGAATTGGAATTTGACCAAGACGCACT
TCAAGCGATTGCTGAAAAAGCCATCGAACGAAAAACTGGTGCGCGTGGTCTTCGCTCAATTATTGAAGAAACTATGCTGG
ATGTCATGTTTGAAGTACCAAGTCAAGCAGAAGTCAAGCGTGTACGTATTACCAAAGAAGCAGTTGACGGGACAGACAAG
CCACTCTTAGAAACTGCATAA

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (9-45)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (309-387)

• AAA domain (Cdc48 subfamily) (AAA_2) (107-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	86.967	98.276	0.855
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.706	99.015	0.581