Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   PWF74_RS08785 Genome accession   NZ_CP118627
Coordinates   1755790..1757037 (-) Length   415 a.a.
NCBI ID   WP_014025467.1    Uniprot ID   A0AA43PEA3
Organism   Lactococcus garvieae strain Pa-2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1750790..1762037
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWF74_RS10910 - 1752417..1753184 (-) 768 Protein_1711 PolC-type DNA polymerase III N-terminal domain-containing protein -
  PWF74_RS08780 (PWF74_08780) - 1753913..1755763 (-) 1851 WP_003133504.1 proline--tRNA ligase -
  PWF74_RS08785 (PWF74_08785) eeP 1755790..1757037 (-) 1248 WP_014025467.1 RIP metalloprotease RseP Regulator
  PWF74_RS08790 (PWF74_08790) - 1757213..1758007 (-) 795 WP_003133509.1 phosphatidate cytidylyltransferase -
  PWF74_RS08795 (PWF74_08795) - 1758004..1758741 (-) 738 WP_003133511.1 isoprenyl transferase -
  PWF74_RS08800 (PWF74_08800) yajC 1758941..1759276 (-) 336 WP_165706241.1 preprotein translocase subunit YajC -
  PWF74_RS08805 (PWF74_08805) - 1759351..1759998 (-) 648 WP_165706240.1 DNA alkylation repair protein -
  PWF74_RS08810 (PWF74_08810) rlmH 1759995..1760474 (-) 480 WP_003133515.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PWF74_RS08815 (PWF74_08815) htrA 1760778..1761995 (+) 1218 WP_003133516.1 S1C family serine protease Regulator

Sequence


Protein


Download         Length: 415 a.a.        Molecular weight: 45097.57 Da        Isoelectric Point: 5.8048

>NTDB_id=794062 PWF74_RS08785 WP_014025467.1 1755790..1757037(-) (eeP) [Lactococcus garvieae strain Pa-2]
MIQTLVTFIIVFGIIVVVHEYGHLFFAKRAGILVREFSIGMGPKIFAHQAKDGTFYSIRILPLGGYVRMAGWGDDTTEIK
KGTPASLMIVENQVVKINLSERVTLENSVPMLVTEYDFEEALFIEGEVFGEIKRYSVDHDATIIEADGTELRIAPRDVQY
QSASVLGKILTNFAGPLNNFILGIIAFIIITFMQGGVPSNTNQIGQVQSGTPAYSAGLQPKDKIQAVNGEKTGNWQEVVQ
RISANDGSEIKLDIERDGASKTLELKPEKIDGRYRIGITQTIKTGFLDKLTGGFTQAANAATLIFKALGNLIAQPSLDKL
GGPVAIYDLSGQAAREGLLSIIALLAMLSINLGIVNLIPIPVLDGGKIVLNIVEALRGKPLSQEKEGILTLVGLVFMVVL
MIAVTWNDILRAFIR

Nucleotide


Download         Length: 1248 bp        

>NTDB_id=794062 PWF74_RS08785 WP_014025467.1 1755790..1757037(-) (eeP) [Lactococcus garvieae strain Pa-2]
TTGATTCAAACATTGGTAACATTTATCATTGTCTTTGGTATTATTGTTGTTGTACATGAATATGGTCATCTGTTCTTTGC
CAAACGCGCGGGGATTTTAGTTCGCGAGTTTTCCATTGGAATGGGCCCCAAAATTTTTGCACATCAAGCCAAAGATGGCA
CATTTTATAGCATTCGTATACTTCCTCTTGGAGGTTATGTACGCATGGCGGGCTGGGGCGATGATACAACGGAAATAAAA
AAAGGCACCCCGGCATCTTTGATGATTGTTGAAAATCAGGTGGTTAAAATTAATCTTTCTGAACGGGTAACTTTGGAAAA
CAGTGTCCCCATGCTGGTCACTGAATACGATTTTGAAGAAGCTCTTTTCATTGAAGGAGAAGTTTTTGGTGAAATAAAAC
GTTATTCAGTTGACCATGACGCAACAATTATTGAAGCTGATGGAACGGAACTTCGTATCGCTCCACGAGATGTACAATAT
CAAAGTGCTAGCGTTCTCGGCAAGATTTTAACAAATTTTGCTGGCCCTTTAAATAACTTTATTTTAGGGATTATAGCTTT
TATTATCATCACTTTTATGCAAGGTGGTGTACCTTCTAATACAAATCAAATCGGACAAGTTCAATCGGGTACCCCTGCTT
ATTCAGCAGGTTTACAGCCAAAAGATAAAATCCAAGCAGTCAATGGCGAAAAAACGGGCAACTGGCAAGAAGTTGTCCAA
CGGATTAGTGCAAATGACGGCAGTGAAATCAAGCTGGATATTGAACGGGATGGCGCGTCGAAGACACTAGAGCTCAAACC
GGAAAAAATTGACGGAAGATATCGTATTGGTATCACTCAGACAATTAAAACGGGCTTTTTAGATAAACTAACGGGTGGCT
TTACCCAAGCTGCTAACGCAGCCACACTGATATTTAAAGCTTTAGGCAATCTTATAGCACAGCCAAGCCTTGATAAACTT
GGTGGCCCCGTCGCTATTTATGATTTAAGTGGACAAGCAGCCCGAGAAGGCCTATTATCCATCATCGCTTTACTTGCCAT
GCTCTCAATCAATCTGGGAATCGTCAATTTAATCCCAATTCCCGTCCTTGACGGAGGGAAAATCGTCCTCAATATTGTTG
AGGCCTTACGAGGCAAACCACTTTCACAAGAAAAAGAAGGAATTTTAACACTTGTGGGTCTTGTCTTTATGGTGGTTCTG
ATGATTGCTGTGACTTGGAATGATATTCTCCGAGCCTTTATTAGATAA

Domains


Predicted by InterproScan.

(7-400)

(204-256)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

56.325

100

0.569

  eeP Streptococcus thermophilus LMD-9

56.086

100

0.566