Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   PWF74_RS00950 Genome accession   NZ_CP118627
Coordinates   205312..205995 (+) Length   227 a.a.
NCBI ID   WP_165705976.1    Uniprot ID   -
Organism   Lactococcus garvieae strain Pa-2     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 200312..210995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PWF74_RS00940 (PWF74_00940) rpoC 200420..204067 (+) 3648 WP_004259228.1 DNA-directed RNA polymerase subunit beta' -
  PWF74_RS00945 (PWF74_00945) - 204160..205068 (-) 909 WP_165705977.1 diacylglycerol/lipid kinase family protein -
  PWF74_RS00950 (PWF74_00950) mecA 205312..205995 (+) 684 WP_165705976.1 adaptor protein MecA Regulator
  PWF74_RS00955 (PWF74_00955) - 205999..207255 (+) 1257 WP_074750514.1 glycosyltransferase family 4 protein -
  PWF74_RS00960 (PWF74_00960) sufC 207333..208103 (+) 771 WP_014024332.1 Fe-S cluster assembly ATPase SufC -
  PWF74_RS00965 (PWF74_00965) sufD 208175..209431 (+) 1257 WP_019299087.1 Fe-S cluster assembly protein SufD -
  PWF74_RS00970 (PWF74_00970) - 209431..210642 (+) 1212 WP_274978370.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26240.37 Da        Isoelectric Point: 3.9988

>NTDB_id=794039 PWF74_RS00950 WP_165705976.1 205312..205995(+) (mecA) [Lactococcus garvieae strain Pa-2]
MQYEEINEKTIKISLTFQDLVDHDVKLSDFFTNQSMVENLFYELVEELGLEERFSSGLLTFQIQPFPKGVDIIVTEENID
IDPNNLPDDPEEFEQLMTDFFGRVEDLKQNGGTMADTSTTETKETKVENKPDPDFVFYSLEFENMSQLLTAVKNVKIDAE
ESELYSYQDKFYLIILDNQKSKGKTAVSSMRARMLEYGQETVNSRETLQEYGEILINTRALEVLSKI

Nucleotide


Download         Length: 684 bp        

>NTDB_id=794039 PWF74_RS00950 WP_165705976.1 205312..205995(+) (mecA) [Lactococcus garvieae strain Pa-2]
ATGCAATACGAAGAAATAAACGAAAAAACGATAAAGATTAGCCTAACCTTTCAAGATTTGGTTGATCATGATGTCAAACT
CTCTGATTTTTTTACTAACCAGTCGATGGTTGAAAATCTTTTTTATGAATTAGTAGAAGAACTGGGACTTGAGGAAAGAT
TCTCATCAGGACTTTTAACTTTCCAAATTCAACCTTTCCCTAAAGGGGTGGATATCATTGTTACCGAGGAAAATATTGAT
ATTGATCCCAATAATCTCCCGGATGATCCTGAAGAATTTGAGCAGCTGATGACGGATTTCTTTGGGCGTGTGGAAGATTT
AAAACAAAATGGCGGAACAATGGCAGATACAAGTACAACTGAAACGAAAGAAACAAAAGTAGAAAATAAACCAGACCCAG
ATTTTGTCTTCTATTCTCTAGAATTTGAAAATATGTCTCAACTTTTGACAGCTGTAAAAAATGTTAAAATTGATGCAGAA
GAGTCTGAACTTTACAGTTACCAAGATAAGTTTTATTTGATTATTTTGGACAATCAAAAATCAAAAGGAAAAACAGCCGT
AAGTTCGATGCGTGCCCGAATGTTAGAATATGGCCAGGAAACGGTCAACAGTCGTGAAACCCTACAAGAATACGGCGAGA
TACTAATCAATACGCGTGCTTTGGAAGTTCTCTCAAAAATTTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

54.077

100

0.555
  mecA Lactococcus lactis subsp. lactis strain DGCC12653

54.077

100

0.555