Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PVT68_RS10015 Genome accession   NZ_CP118605
Coordinates   2411827..2412222 (-) Length   131 a.a.
NCBI ID   WP_105102769.1    Uniprot ID   -
Organism   Microbulbifer bruguierae strain H12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2406827..2417222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVT68_RS10000 (PVT68_10000) - 2408244..2410400 (-) 2157 WP_280317644.1 methyl-accepting chemotaxis protein -
  PVT68_RS10005 (PVT68_10005) - 2410663..2411205 (-) 543 WP_280317646.1 chemotaxis protein CheW -
  PVT68_RS10010 (PVT68_10010) pilH 2411224..2411586 (-) 363 WP_280317647.1 twitching motility response regulator PilH -
  PVT68_RS10015 (PVT68_10015) pilG 2411827..2412222 (-) 396 WP_105102769.1 twitching motility response regulator PilG Regulator
  PVT68_RS10020 (PVT68_10020) gshB 2412638..2413594 (+) 957 WP_280317652.1 glutathione synthase -
  PVT68_RS10025 (PVT68_10025) - 2413677..2414618 (+) 942 WP_280317654.1 energy transducer TonB -
  PVT68_RS10030 (PVT68_10030) - 2414653..2415246 (+) 594 WP_280317656.1 YqgE/AlgH family protein -
  PVT68_RS10035 (PVT68_10035) ruvX 2415394..2415831 (+) 438 WP_280317658.1 Holliday junction resolvase RuvX -
  PVT68_RS10040 (PVT68_10040) hemC 2415889..2416863 (+) 975 WP_280317659.1 hydroxymethylbilane synthase -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14360.60 Da        Isoelectric Point: 7.2147

>NTDB_id=793913 PVT68_RS10015 WP_105102769.1 2411827..2412222(-) (pilG) [Microbulbifer bruguierae strain H12]
MELNWESLTVMVIDDSKTIRRTAETLLQKAGCTVVTATDGFDALAKIADSRPDIIFVDIMMPRLDGYQTCALIKNNSEFR
STPVIMLSSKDGLFDKAKGRVVGCDQYLTKPFSKSELLGAISAHAKPHHAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=793913 PVT68_RS10015 WP_105102769.1 2411827..2412222(-) (pilG) [Microbulbifer bruguierae strain H12]
ATGGAGCTCAACTGGGAAAGTCTCACCGTGATGGTGATCGACGACAGTAAAACTATTCGTCGCACCGCCGAGACGCTGCT
GCAGAAAGCAGGCTGTACGGTGGTTACGGCTACCGATGGCTTCGATGCGCTGGCAAAGATCGCCGATTCACGTCCCGACA
TCATTTTTGTAGACATTATGATGCCGCGCCTTGATGGCTATCAGACTTGCGCGCTGATCAAAAACAACAGTGAATTCCGC
AGTACGCCGGTCATCATGCTCTCCAGTAAGGATGGCCTGTTCGACAAGGCGAAAGGTCGTGTGGTGGGGTGCGACCAGTA
CCTGACCAAGCCTTTCAGCAAAAGCGAACTGCTGGGGGCAATTTCTGCGCACGCAAAGCCTCACCATGCAGCTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75

94.656

0.71
  vicR Streptococcus mutans UA159

41.88

89.313

0.374