Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   Q7572_RS17885 Genome accession   NZ_CP131878
Coordinates   3668309..3668944 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3663309..3673944
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS17865 (Q7572_17900) - 3663386..3664201 (+) 816 WP_004710941.1 DsbC family protein -
  Q7572_RS17870 (Q7572_17905) - 3664446..3665747 (+) 1302 WP_002048970.1 homoserine dehydrogenase -
  Q7572_RS17875 (Q7572_17910) thrC 3665803..3666942 (+) 1140 WP_002048893.1 threonine synthase -
  Q7572_RS17880 (Q7572_17915) pbpG 3667051..3668097 (-) 1047 WP_004710943.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  Q7572_RS17885 (Q7572_17920) letA 3668309..3668944 (+) 636 WP_000633799.1 response regulator Regulator
  Q7572_RS17890 (Q7572_17925) pilS 3668955..3670523 (+) 1569 WP_004883633.1 PAS domain-containing sensor histidine kinase Regulator
  Q7572_RS17895 (Q7572_17930) - 3670548..3671969 (+) 1422 WP_004883635.1 sigma-54 dependent transcriptional regulator -
  Q7572_RS17900 (Q7572_17935) - 3671973..3673157 (-) 1185 WP_004883636.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=793729 Q7572_RS17885 WP_000633799.1 3668309..3668944(+) (letA) [Acinetobacter nosocomialis strain 2014S01-097]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=793729 Q7572_RS17885 WP_000633799.1 3668309..3668944(+) (letA) [Acinetobacter nosocomialis strain 2014S01-097]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCAGATGT
TGAGGTAATTGGACAAGCCGAATCTGGGGAAGAAGCTATTGCTATCGTTCGCCAGCAACATCCGCAAGTCGTACTACTTG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACTCGCCGTTTATTACAAACAGCTCCAGAGACGAAAGTCATTGCT
GTAAGTGGCCTTGCCGAAGAACCCTACCCATCTTTATTGCTAAAAGCTGGAGCAAAAGGCTATATCACCAAAGGGGCCCC
AATTGCCGAGATGGTTCGTGCAATTAATAAGGTCATGCAGGGTGGTAAATATTTTAGTGCCGATATTGCGGAGCAACTGG
CAAGCTCTTATTTATCTGATACTCAACAATCTCCTTTTGATTCTTTATCGGAACGGGAAATGCAAGTTGCGATGATGGTC
GTTAACTGTATTAGCGCACAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTACCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTCACACATCTTGCGATTCGTTACGGTCTGATCAAACCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55