Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   Q7572_RS07790 Genome accession   NZ_CP131878
Coordinates   1621066..1622559 (-) Length   497 a.a.
NCBI ID   WP_004708399.1    Uniprot ID   A0AA36NYD0
Organism   Acinetobacter nosocomialis strain 2014S01-097     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1616066..1627559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7572_RS07765 (Q7572_07775) - 1617158..1617802 (-) 645 WP_004708391.1 hypothetical protein -
  Q7572_RS07770 (Q7572_07780) ispF 1617906..1618388 (+) 483 WP_002049661.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  Q7572_RS07775 (Q7572_07785) - 1618385..1618909 (-) 525 WP_004886872.1 protein tyrosine phosphatase family protein -
  Q7572_RS07780 (Q7572_07790) argF 1619102..1620022 (-) 921 WP_004708394.1 ornithine carbamoyltransferase -
  Q7572_RS07785 (Q7572_07795) adeN 1620136..1620789 (-) 654 WP_004708396.1 multidrug efflux transcriptional repressor AdeN -
  Q7572_RS07790 (Q7572_07800) luxO 1621066..1622559 (-) 1494 WP_004708399.1 nitrogen regulation protein NR(I) Regulator
  Q7572_RS07795 (Q7572_07805) glnL 1622546..1623655 (-) 1110 WP_002049598.1 nitrogen regulation protein NR(II) -
  Q7572_RS07800 (Q7572_07810) rimO 1623997..1625340 (+) 1344 WP_000856678.1 30S ribosomal protein S12 methylthiotransferase RimO -
  Q7572_RS07805 (Q7572_07815) pyrH 1625392..1626120 (+) 729 WP_000852257.1 UMP kinase -
  Q7572_RS07810 (Q7572_07820) frr 1626206..1626760 (+) 555 WP_002049637.1 ribosome recycling factor -
  Q7572_RS07815 (Q7572_07825) uppS 1626765..1627517 (+) 753 WP_004708401.1 polyprenyl diphosphate synthase -

Sequence

Protein


Download         Length: 497 a.a.        Molecular weight: 56250.08 Da        Isoelectric Point: 6.3154

>NTDB_id=793693 Q7572_RS07790 WP_004708399.1 1621066..1622559(-) (luxO) [Acinetobacter nosocomialis strain 2014S01-097]
MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVII
MTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLS
QSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL
DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDI
PMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKNSEASQ
PAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD
SADDDDEDEHKVTLSEA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=793693 Q7572_RS07790 WP_004708399.1 1621066..1622559(-) (luxO) [Acinetobacter nosocomialis strain 2014S01-097]
GTGTCGCGAAATAAAATATGGGTTATTGATGACGATCGCGCCATGCGATGGGTACTTGAAAAGACCTTTAAAGAAGAAGG
ATTTGACGTCACCAATTTTGAAGAAGCTCAAACAGCACTCGAACGTTTACATCATGATGCGCCGGATGTCATCTTAACTG
ACATCCGTATGCCAGGCATTGATGGGTTAACTTTCTTATCTAAAGTAAAAAACTCTCATCCTGATTTGCCTGTGATCATT
ATGACAGCGCATTCGGACTTAGAGTCTGCTGTATCTAGCTATCAAACTGGTGCATTTGAGTATTTACCAAAACCGTTTGA
TATTGATGAAGCTTTAGCTTTAGTCAATCGAGCAATTTTACATATCAATAAATTGCAGCAACAAGAGGCTACAAAAACTG
CTTCTCCGCTACAATCGACAGAAATTATTGGTGAATCTCCAGCTATGCAAGAGGTTTTCCGAGCAATTGGTCGCTTATCT
CAGTCGCATATTACCGTTTTAATTAATGGTGAGTCAGGAACAGGTAAAGAATTAGTTGCACATGCTTTACATAAGCATTC
ACCACGCAGAGCCAAACCATTTATTGCTCTAAACATGGCAGCAATTCCGAAAGACTTAATTGAAACGGAATTATTTGGCC
ATGAAAAAGGTGCTTTTACTGGCGCTAATACTCAACATCAAGGTCGCTTTGAACAAGCCAATGGCGGCACTCTCTTCCTT
GATGAAATTGGTGACATGCCATTTGAAACACAGACGCGATTACTACGTGTACTCGCAGATGGTGAGTTTTACCGCGTTGG
CGGGCATATCCCTGTTAAAGTTGATGTTCGGATCGTAGCGGCAACACACCAAGATTTAGAAAAATTGGTAAATGAAGGTC
GCTTCCGTGAAGACTTATACCACCGTCTAAATGTAATTCGTATTCATATTCCTAAGCTTGCACATCGAAGTGAAGATATT
CCGATGTTAGCTCAACATTTCTTGGCTCGTGCTGGTAAAGAGTTAGGCGTAAGTCCAAAGATTTTACGTACCGAGACAAC
TGACTATATGCAGCAATTACCATGGCCCGGTAATGTTCGTCAGCTTGAAAATACCTGCCGCTGGTTAACCGTCATGATTA
CTGGCCGTGAGGTTTACCCAGAAGATTTACCTTCAGAACTTAAACAAGTTCCACTCCAAAAAAATAGTGAAGCTAGCCAA
CCTGCTCCATCTTTTGAGCGTATTTCTTTACATCATTGGGATGAGCTACTAAGTCAATGGGCAATTCAAAAACTCAAAAA
TGGCGAAATGAAGATTTTGGATATTGCTACACCAATGTTTGAGCGTACTTTAATTAATGCTGCACTACAGCAAACTCGTG
GGCGCAAACGTCATGCAGCCGAGCTATTAGGTTGGGGTCGTAACACTCTAACCCGAAAGTTAAAAGAACTAGGTATGGAT
TCTGCTGATGACGATGATGAGGATGAACACAAAGTAACTTTGTCTGAAGCTTAA

Domains

Predicted by InterProScan.

Bacterial regulatory protein, Fis family (HTH_8)

(439-477)

Response regulator receiver domain (Response_reg)

(6-115)

Sigma-54 interaction domain (Sigma54_activat)

(142-309)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36NYD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

40.402

90.141

0.364
  pilR Pseudomonas aeruginosa PAK

37.5

96.579

0.362