Detailed information NTG0079351

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: QMM33_RS10460
• Genome accession: NZ_AP025940
• Coordinates: 2059685..2060782 (+)
• Length: 365 a.a.
• NCBI ID: WP_050207061.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700204
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2054685..2065782

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM33_RS10435 (PC0204_20070)	pgsA	2055206..2055751 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
QMM33_RS10440 (PC0204_20080)	rodZ	2055762..2056583 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
QMM33_RS10445 (PC0204_20090)	-	2056625..2057908 (-)	1284	WP_281737392.1	pitrilysin family protein	-
QMM33_RS10450 (PC0204_20100)	-	2057905..2059155 (-)	1251	WP_050091322.1	pitrilysin family protein	-
QMM33_RS10455 (PC0204_20110)	-	2059314..2059682 (+)	369	WP_000455898.1	RNA-binding S4 domain-containing protein	-
QMM33_RS10460 (PC0204_20120)	recF	2059685..2060782 (+)	1098	WP_050207061.1	DNA replication/repair protein RecF	Machinery gene
QMM33_RS10465 (PC0204_20130)	guaB	2060833..2062311 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
QMM33_RS10470 (PC0204_20140)	trpS	2062463..2063488 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
QMM33_RS10475 (PC0204_20150)	-	2063694..2065316 (+)	1623	WP_000958760.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41884.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=79351 QMM33_RS10460 WP_050207061.1 2059685..2060782(+) (recF) [Streptococcus pneumoniae strain PZ900700204]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSAVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=79351 QMM33_RS10460 WP_050207061.1 2059685..2060782(+) (recF) [Streptococcus pneumoniae strain PZ900700204]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTGCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCTATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	46.175	100	0.463