Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | PXV21_RS17180 | Genome accession | NZ_CP118567 |
| Coordinates | 3597141..3598199 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain 2020CK-00199 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3564770..3598199 | 3597141..3598199 | within | 0 |
Gene organization within MGE regions
Location: 3564770..3598199
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PXV21_RS16995 (PXV21_16995) | - | 3564770..3566350 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| PXV21_RS17000 (PXV21_17000) | - | 3566362..3567777 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| PXV21_RS17005 (PXV21_17005) | fdrA | 3567777..3569318 (-) | 1542 | WP_022649122.1 | acyl-CoA synthetase FdrA | - |
| PXV21_RS17010 (PXV21_17010) | - | 3569427..3570032 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| PXV21_RS17015 (PXV21_17015) | - | 3570353..3571282 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| PXV21_RS17020 (PXV21_17020) | - | 3571279..3571437 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| PXV21_RS17025 (PXV21_17025) | - | 3571617..3572135 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| PXV21_RS17030 (PXV21_17030) | - | 3572218..3572397 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| PXV21_RS17035 (PXV21_17035) | stpA | 3572435..3572839 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| PXV21_RS17040 (PXV21_17040) | alaE | 3573337..3573786 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| PXV21_RS17045 (PXV21_17045) | - | 3573819..3574163 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| PXV21_RS17050 (PXV21_17050) | - | 3574322..3574648 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| PXV21_RS17055 (PXV21_17055) | nrdH | 3574892..3575131 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| PXV21_RS17060 (PXV21_17060) | nrdI | 3575128..3575538 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| PXV21_RS17065 (PXV21_17065) | nrdE | 3575511..3577655 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| PXV21_RS17070 (PXV21_17070) | nrdF | 3577665..3578624 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| PXV21_RS17075 (PXV21_17075) | proV | 3578958..3580160 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| PXV21_RS17080 (PXV21_17080) | proW | 3580153..3581217 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| PXV21_RS17085 (PXV21_17085) | proX | 3581227..3582222 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| PXV21_RS17090 (PXV21_17090) | - | 3582432..3583616 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| PXV21_RS17095 (PXV21_17095) | emrR | 3583931..3584461 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| PXV21_RS17100 (PXV21_17100) | emrA | 3584590..3585762 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| PXV21_RS17105 (PXV21_17105) | emrB | 3585779..3587326 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| PXV21_RS17110 (PXV21_17110) | - | 3587411..3588517 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| PXV21_RS17115 (PXV21_17115) | - | 3588828..3588971 (+) | 144 | Protein_3348 | hypothetical protein | - |
| PXV21_RS17120 (PXV21_17120) | luxS | 3589033..3589548 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| PXV21_RS17125 (PXV21_17125) | gshA | 3589701..3591245 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| PXV21_RS17130 (PXV21_17130) | - | 3591329..3591757 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| PXV21_RS17135 (PXV21_17135) | yqaB | 3591754..3592320 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| PXV21_RS17165 (PXV21_17165) | csrA | 3593386..3593571 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| PXV21_RS17170 (PXV21_17170) | alaS | 3593813..3596440 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| PXV21_RS17175 (PXV21_17175) | recX | 3596572..3597072 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| PXV21_RS17180 (PXV21_17180) | recA | 3597141..3598199 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=793437 PXV21_RS17180 WP_022649140.1 3597141..3598199(-) (recA) [Enterobacter hormaechei strain 2020CK-00199]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=793437 PXV21_RS17180 WP_022649140.1 3597141..3598199(-) (recA) [Enterobacter hormaechei strain 2020CK-00199]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.