Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   KH172YL63_RS14175 Genome accession   NZ_AP022842
Coordinates   2772128..2772907 (-) Length   259 a.a.
NCBI ID   WP_173106717.1    Uniprot ID   A0A6F8TVM1
Organism   Bacillus sp. KH172YL63     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2767128..2777907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KH172YL63_RS14150 (KH172YL63_28030) yqiS 2767301..2768215 (-) 915 WP_173106712.1 phosphate butyryltransferase -
  KH172YL63_RS14155 (KH172YL63_28040) - 2768367..2770436 (-) 2070 WP_173106713.1 sigma 54-interacting transcriptional regulator -
  KH172YL63_RS14160 (KH172YL63_28050) - 2770562..2770801 (+) 240 WP_173106714.1 DUF2627 domain-containing protein -
  KH172YL63_RS14165 (KH172YL63_28060) - 2770817..2771551 (-) 735 WP_173106715.1 glycerophosphodiester phosphodiesterase -
  KH172YL63_RS14170 (KH172YL63_28070) - 2771700..2771912 (-) 213 WP_173106716.1 hypothetical protein -
  KH172YL63_RS14175 (KH172YL63_28080) spo0A 2772128..2772907 (-) 780 WP_173106717.1 sporulation transcription factor Spo0A Regulator
  KH172YL63_RS14180 (KH172YL63_28090) spoIVB 2773578..2774864 (-) 1287 WP_173106718.1 SpoIVB peptidase -
  KH172YL63_RS14185 (KH172YL63_28100) recN 2774990..2776699 (-) 1710 WP_173106719.1 DNA repair protein RecN Machinery gene
  KH172YL63_RS14190 (KH172YL63_28110) argR 2776803..2777252 (-) 450 WP_173108189.1 transcriptional regulator ArgR -

Sequence

Protein


Download         Length: 259 a.a.        Molecular weight: 28931.36 Da        Isoelectric Point: 6.1595

>NTDB_id=79343 KH172YL63_RS14175 WP_173106717.1 2772128..2772907(-) (spo0A) [Bacillus sp. KH172YL63]
MKSIKVCVVDDNRELTSLLEDYIASQNDMEVVGVAHNGQDCLDLLEEVDPDVLVLDIIMPHLDGLAVLERLRERKNIPNV
IMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVSHIRQVSGKSNSIIKKPSSSRMNTEQKPRNLDASITSIIHEIGVPA
HIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMSKAKPT
NSEFIAMVADKLRLEHMAS

Nucleotide


Download         Length: 780 bp        

>NTDB_id=79343 KH172YL63_RS14175 WP_173106717.1 2772128..2772907(-) (spo0A) [Bacillus sp. KH172YL63]
GTGAAATCGATTAAAGTATGTGTTGTGGATGATAACCGTGAACTAACGTCATTATTGGAGGACTACATTGCTTCACAAAA
TGACATGGAAGTGGTAGGAGTAGCCCATAATGGTCAAGATTGTTTAGATTTATTGGAAGAAGTGGATCCGGACGTCCTCG
TCTTGGATATCATCATGCCCCACCTGGACGGATTGGCGGTGCTTGAAAGACTCCGTGAAAGGAAAAACATCCCGAATGTG
ATCATGTTGACTGCCTTCGGTCAGGAAGATGTCACGAAAAAGGCGGTTGACCTTGGAGCTTCCTATTTCATCCTGAAGCC
ATTTGATATGGAAAACTTAGTGAGCCACATCAGACAAGTGAGCGGTAAATCAAACTCAATCATCAAAAAACCTTCCTCAT
CCAGAATGAATACAGAACAAAAACCGAGAAACCTTGACGCAAGCATTACAAGCATCATCCACGAAATCGGTGTACCGGCA
CATATCAAAGGTTATTTATATCTTCGTGAAGCCATTTCAATGGTGTATAACGATATCGAATTACTTGGCTCGATCACAAA
GGTCCTTTATCCTGATATCGCAAAAAAATACAATACAACGGCCTCAAGGGTGGAAAGGGCAATCCGCCATGCCATCGAGG
TAGCTTGGAGCAGAGGGAATATCGATTCAATTTCATCTTTATTCGGCTACACGGTCAGCATGTCAAAGGCTAAACCAACC
AATTCCGAATTCATTGCCATGGTCGCAGACAAGCTTCGATTGGAGCACATGGCTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-117)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(149-252)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6F8TVM1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

82.397

100

0.849

Multiple sequence alignment