Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | KH172YL63_RS00595 | Genome accession | NZ_AP022842 |
| Coordinates | 114398..116845 (+) | Length | 815 a.a. |
| NCBI ID | WP_173104333.1 | Uniprot ID | A0A6F8TMX9 |
| Organism | Bacillus sp. KH172YL63 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 109398..121845
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KH172YL63_RS00580 (KH172YL63_00890) | - | 112288..112749 (+) | 462 | WP_173104330.1 | CtsR family transcriptional regulator | - |
| KH172YL63_RS00585 (KH172YL63_00900) | - | 112769..113317 (+) | 549 | WP_173104331.1 | UvrB/UvrC motif-containing protein | - |
| KH172YL63_RS00590 (KH172YL63_00910) | - | 113314..114396 (+) | 1083 | WP_173104332.1 | protein arginine kinase | - |
| KH172YL63_RS00595 (KH172YL63_00920) | clpC | 114398..116845 (+) | 2448 | WP_173104333.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| KH172YL63_RS00600 (KH172YL63_00930) | radA | 117274..118650 (+) | 1377 | WP_173104334.1 | DNA repair protein RadA | Machinery gene |
| KH172YL63_RS00605 (KH172YL63_00940) | disA | 118654..119727 (+) | 1074 | WP_173104335.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| KH172YL63_RS00610 (KH172YL63_00950) | - | 119940..121031 (+) | 1092 | WP_173104336.1 | PIN/TRAM domain-containing protein | - |
| KH172YL63_RS00615 (KH172YL63_00960) | ispD | 121111..121815 (+) | 705 | WP_173104337.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
Sequence
Protein
Download Length: 815 a.a. Molecular weight: 90625.26 Da Isoelectric Point: 5.8756
>NTDB_id=79321 KH172YL63_RS00595 WP_173104333.1 114398..116845(+) (clpC) [Bacillus sp. KH172YL63]
MMFGRFTERAQKVLALAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKALTALGLSPEKIQKEVEGLIGKGTEKSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVLQLLGSNDSSNHQGGGNANANT
PTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIANEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVNEPTAEESIQILKGLRDRYEAHHRVSITDEAIDAAVKMSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPNLKELEAKLEEIRKEKDAAVQSQEFEKAASLRDSEQKLREELEETKNTWKEKQGQENTEVTVEDIAKVV
SNWTGVPVSKLAQTETDRLLKLEEILHSRVIGQSEAVVAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGAQSLKSNKYVGFNIQDGQQDYKDMKGKVMEELKRAFRPEFLNRIDEIIVFHSLEKDHLK
EIVTLMSNQLTTRLKEQDIHLELSAAAKEKIAEEGFDPEYGARPLRRAIQKYVEDKLSEELLRGKVLTGQNILIDVEENE
FVVKVQKEEAANTTT
MMFGRFTERAQKVLALAQEEAIRLSHSNIGTEHILLGLVREGEGIAAKALTALGLSPEKIQKEVEGLIGKGTEKSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLGNLGVSLNKARQQVLQLLGSNDSSNHQGGGNANANT
PTLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIANEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVNEPTAEESIQILKGLRDRYEAHHRVSITDEAIDAAVKMSDRYISDRFLPDKAIDLIDEAGS
KVRLRSYTTPPNLKELEAKLEEIRKEKDAAVQSQEFEKAASLRDSEQKLREELEETKNTWKEKQGQENTEVTVEDIAKVV
SNWTGVPVSKLAQTETDRLLKLEEILHSRVIGQSEAVVAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAE
SMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTVLIMTSNVGAQSLKSNKYVGFNIQDGQQDYKDMKGKVMEELKRAFRPEFLNRIDEIIVFHSLEKDHLK
EIVTLMSNQLTTRLKEQDIHLELSAAAKEKIAEEGFDPEYGARPLRRAIQKYVEDKLSEELLRGKVLTGQNILIDVEENE
FVVKVQKEEAANTTT
Nucleotide
Download Length: 2448 bp
>NTDB_id=79321 KH172YL63_RS00595 WP_173104333.1 114398..116845(+) (clpC) [Bacillus sp. KH172YL63]
ATGATGTTTGGTCGATTTACAGAAAGAGCACAAAAAGTATTGGCGCTGGCTCAAGAAGAAGCGATTCGTTTATCGCACAG
TAACATTGGCACTGAACATATTTTATTAGGACTTGTCCGGGAAGGTGAAGGGATTGCTGCGAAGGCCCTTACGGCATTGG
GGTTGAGCCCTGAGAAGATCCAGAAGGAAGTGGAAGGGCTGATCGGCAAAGGTACAGAGAAGTCCCAAACGATTCATTAC
ACACCTCGGGCTAAGAAAGTGATTGAACTTTCAATGGATGAGGCCCGTAAACTCGGTCACTCATATGTAGGAACGGAGCA
TATTTTACTCGGGTTGATCCGTGAAGGCGAAGGAGTCGCTGCACGGGTGCTCGGAAATCTGGGTGTGAGCTTGAATAAAG
CACGTCAGCAGGTACTTCAGCTACTAGGCAGCAATGATTCAAGCAACCACCAGGGCGGAGGCAATGCAAATGCCAACACG
CCAACCCTTGACAGCTTAGCCCGTGACCTGACGGCGATAGCACGTGAAGGCAGCTTGGATCCGGTCATCGGAAGAAGTAA
GGAAATCCAACGGGTGATCGAAGTTCTAAGCCGCCGTACAAAGAATAACCCGGTATTGATCGGGGAGCCTGGTGTCGGGA
AAACAGCGATAGCAGAAGGTCTGGCACAACAGATCATTGCCAATGAAGTGCCGGAGATCCTGCGGGATAAACGGGTAATG
ACACTTGATATGGGTACGGTGGTCGCCGGTACGAAATACCGTGGTGAATTCGAGGACCGTCTGAAGAAAGTCATGGACGA
AATCCGTCAGGCAGGAAACATCATCCTGTTCATCGATGAACTTCATACATTGATCGGAGCAGGTGGTGCAGAAGGGGCAA
TCGATGCATCGAATATCCTGAAACCATCCCTTGCCCGTGGTGAGTTGCAATGTATCGGAGCGACGACATTGGATGAGTAT
CGTAAATATATCGAAAAGGATGCTGCACTGGAGCGCCGTTTCCAACCGATCCAGGTCAATGAACCTACGGCCGAAGAGTC
CATCCAGATTCTGAAGGGGTTACGGGACCGTTATGAAGCCCATCACCGCGTATCGATTACCGATGAAGCGATCGATGCGG
CAGTGAAGATGTCTGACCGTTATATTTCAGACCGATTCCTTCCGGATAAAGCGATTGATTTAATTGATGAAGCCGGTTCT
AAGGTGAGATTGCGCTCATACACGACACCGCCGAACCTGAAAGAGCTCGAAGCCAAGCTTGAAGAGATCCGCAAAGAAAA
GGATGCAGCCGTTCAAAGTCAGGAATTTGAAAAAGCTGCTTCACTGCGGGATTCAGAGCAGAAGCTCCGTGAAGAGTTAG
AGGAAACGAAGAATACATGGAAAGAAAAACAAGGTCAGGAAAACACAGAAGTGACCGTTGAAGATATCGCCAAGGTTGTA
TCGAACTGGACGGGAGTGCCTGTTTCAAAGCTTGCACAAACAGAAACAGACCGTTTGCTGAAATTGGAGGAAATCCTTCA
TTCCCGGGTGATTGGTCAATCTGAAGCGGTAGTCGCCGTTTCGAAAGCTGTCCGTCGTGCACGTGCCGGACTGAAAGATC
CGAAGCGCCCGATTGGTTCCTTTGTCTTCCTTGGACCGACTGGTGTAGGGAAAACGGAACTTGCCCGTGCGCTTGCAGAA
TCGATGTTCGGGGATGAAGATGCGATGATCCGCATCGATATGTCCGAGTATATGGAAAAACACTCGACATCCCGCTTGGT
TGGTTCACCTCCAGGATATGTAGGGTATGAAGAGGGCGGTCAACTGACTGAAAAAGTTCGCCGTAAACCATATTCTGTCG
TCCTTCTCGATGAGATTGAAAAAGCCCACCCGGATGTATTCAACATCTTGCTTCAAGTGCTGGAAGATGGCCGTTTGACT
GATTCGAAGGGCAGAACGGTCGACTTTAGGAATACGGTCCTGATCATGACTTCGAACGTTGGGGCACAGTCGCTTAAGAG
CAATAAATATGTCGGCTTCAACATCCAGGATGGTCAGCAGGATTATAAGGATATGAAAGGGAAGGTCATGGAAGAGCTGA
AGCGTGCATTCCGACCTGAATTCCTGAACCGTATCGATGAAATCATCGTGTTCCATTCTCTTGAAAAAGATCACTTGAAA
GAGATTGTGACATTGATGTCCAATCAATTGACAACTCGCTTGAAAGAACAGGATATTCATCTGGAACTTTCAGCGGCAGC
AAAAGAGAAGATCGCAGAAGAAGGATTCGATCCTGAATACGGGGCACGTCCACTTCGCCGTGCGATTCAGAAATATGTAG
AAGATAAACTGTCAGAAGAGCTGCTTAGAGGCAAAGTACTTACTGGCCAGAATATCCTCATCGATGTAGAAGAGAATGAG
TTTGTGGTCAAAGTTCAAAAAGAAGAAGCGGCAAACACGACGACATAA
ATGATGTTTGGTCGATTTACAGAAAGAGCACAAAAAGTATTGGCGCTGGCTCAAGAAGAAGCGATTCGTTTATCGCACAG
TAACATTGGCACTGAACATATTTTATTAGGACTTGTCCGGGAAGGTGAAGGGATTGCTGCGAAGGCCCTTACGGCATTGG
GGTTGAGCCCTGAGAAGATCCAGAAGGAAGTGGAAGGGCTGATCGGCAAAGGTACAGAGAAGTCCCAAACGATTCATTAC
ACACCTCGGGCTAAGAAAGTGATTGAACTTTCAATGGATGAGGCCCGTAAACTCGGTCACTCATATGTAGGAACGGAGCA
TATTTTACTCGGGTTGATCCGTGAAGGCGAAGGAGTCGCTGCACGGGTGCTCGGAAATCTGGGTGTGAGCTTGAATAAAG
CACGTCAGCAGGTACTTCAGCTACTAGGCAGCAATGATTCAAGCAACCACCAGGGCGGAGGCAATGCAAATGCCAACACG
CCAACCCTTGACAGCTTAGCCCGTGACCTGACGGCGATAGCACGTGAAGGCAGCTTGGATCCGGTCATCGGAAGAAGTAA
GGAAATCCAACGGGTGATCGAAGTTCTAAGCCGCCGTACAAAGAATAACCCGGTATTGATCGGGGAGCCTGGTGTCGGGA
AAACAGCGATAGCAGAAGGTCTGGCACAACAGATCATTGCCAATGAAGTGCCGGAGATCCTGCGGGATAAACGGGTAATG
ACACTTGATATGGGTACGGTGGTCGCCGGTACGAAATACCGTGGTGAATTCGAGGACCGTCTGAAGAAAGTCATGGACGA
AATCCGTCAGGCAGGAAACATCATCCTGTTCATCGATGAACTTCATACATTGATCGGAGCAGGTGGTGCAGAAGGGGCAA
TCGATGCATCGAATATCCTGAAACCATCCCTTGCCCGTGGTGAGTTGCAATGTATCGGAGCGACGACATTGGATGAGTAT
CGTAAATATATCGAAAAGGATGCTGCACTGGAGCGCCGTTTCCAACCGATCCAGGTCAATGAACCTACGGCCGAAGAGTC
CATCCAGATTCTGAAGGGGTTACGGGACCGTTATGAAGCCCATCACCGCGTATCGATTACCGATGAAGCGATCGATGCGG
CAGTGAAGATGTCTGACCGTTATATTTCAGACCGATTCCTTCCGGATAAAGCGATTGATTTAATTGATGAAGCCGGTTCT
AAGGTGAGATTGCGCTCATACACGACACCGCCGAACCTGAAAGAGCTCGAAGCCAAGCTTGAAGAGATCCGCAAAGAAAA
GGATGCAGCCGTTCAAAGTCAGGAATTTGAAAAAGCTGCTTCACTGCGGGATTCAGAGCAGAAGCTCCGTGAAGAGTTAG
AGGAAACGAAGAATACATGGAAAGAAAAACAAGGTCAGGAAAACACAGAAGTGACCGTTGAAGATATCGCCAAGGTTGTA
TCGAACTGGACGGGAGTGCCTGTTTCAAAGCTTGCACAAACAGAAACAGACCGTTTGCTGAAATTGGAGGAAATCCTTCA
TTCCCGGGTGATTGGTCAATCTGAAGCGGTAGTCGCCGTTTCGAAAGCTGTCCGTCGTGCACGTGCCGGACTGAAAGATC
CGAAGCGCCCGATTGGTTCCTTTGTCTTCCTTGGACCGACTGGTGTAGGGAAAACGGAACTTGCCCGTGCGCTTGCAGAA
TCGATGTTCGGGGATGAAGATGCGATGATCCGCATCGATATGTCCGAGTATATGGAAAAACACTCGACATCCCGCTTGGT
TGGTTCACCTCCAGGATATGTAGGGTATGAAGAGGGCGGTCAACTGACTGAAAAAGTTCGCCGTAAACCATATTCTGTCG
TCCTTCTCGATGAGATTGAAAAAGCCCACCCGGATGTATTCAACATCTTGCTTCAAGTGCTGGAAGATGGCCGTTTGACT
GATTCGAAGGGCAGAACGGTCGACTTTAGGAATACGGTCCTGATCATGACTTCGAACGTTGGGGCACAGTCGCTTAAGAG
CAATAAATATGTCGGCTTCAACATCCAGGATGGTCAGCAGGATTATAAGGATATGAAAGGGAAGGTCATGGAAGAGCTGA
AGCGTGCATTCCGACCTGAATTCCTGAACCGTATCGATGAAATCATCGTGTTCCATTCTCTTGAAAAAGATCACTTGAAA
GAGATTGTGACATTGATGTCCAATCAATTGACAACTCGCTTGAAAGAACAGGATATTCATCTGGAACTTTCAGCGGCAGC
AAAAGAGAAGATCGCAGAAGAAGGATTCGATCCTGAATACGGGGCACGTCCACTTCGCCGTGCGATTCAGAAATATGTAG
AAGATAAACTGTCAGAAGAGCTGCTTAGAGGCAAAGTACTTACTGGCCAGAATATCCTCATCGATGTAGAAGAGAATGAG
TTTGTGGTCAAAGTTCAAAAAGAAGAAGCGGCAAACACGACGACATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
88.06 |
98.65 |
0.869 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.499 |
98.405 |
0.497 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.053 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMD-9 |
45.67 |
100 |
0.472 |
| clpC | Streptococcus mutans UA159 |
44.94 |
100 |
0.458 |
| clpC | Streptococcus pneumoniae D39 |
46.5 |
98.16 |
0.456 |
| clpC | Streptococcus pneumoniae Rx1 |
46.5 |
98.16 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.375 |
98.16 |
0.455 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.512 |
83.804 |
0.423 |
| clpE | Streptococcus mutans UA159 |
54.896 |
76.442 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
53.061 |
78.16 |
0.415 |
| clpE | Streptococcus pneumoniae D39 |
53.061 |
78.16 |
0.415 |
| clpE | Streptococcus pneumoniae R6 |
53.061 |
78.16 |
0.415 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.987 |
78.037 |
0.413 |