Detailed information NTG0792608

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: Q7609_RS01460
• Genome accession: NZ_CP131725
• Coordinates: 290915..292150 (-)
• Length: 411 a.a.
• NCBI ID: WP_005658618.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 2018S05-172
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 285915..297150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7609_RS01425 (Q7609_01425)	-	286409..287029 (-)	621	WP_042600623.1	YigZ family protein	-
Q7609_RS01430 (Q7609_01430)	tusA	287145..287384 (+)	240	WP_005665561.1	sulfurtransferase TusA	-
Q7609_RS01435 (Q7609_01435)	htpX	287427..288281 (-)	855	WP_162837812.1	protease HtpX	-
Q7609_RS01440 (Q7609_01440)	-	288446..288835 (-)	390	WP_005630808.1	RidA family protein	-
Q7609_RS01445 (Q7609_01445)	-	288892..289644 (-)	753	WP_112095913.1	VacJ family lipoprotein	-
Q7609_RS01450 (Q7609_01450)	nusG	289796..290353 (-)	558	WP_005648601.1	transcription termination/antitermination protein NusG	-
Q7609_RS01455 (Q7609_01455)	secE	290355..290771 (-)	417	WP_005648602.1	preprotein translocase subunit SecE	-
Q7609_RS01460 (Q7609_01460)	clpX	290915..292150 (-)	1236	WP_005658618.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
Q7609_RS01465 (Q7609_01465)	clpP	292160..292771 (-)	612	WP_257003823.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
Q7609_RS01470 (Q7609_01470)	tig	292864..294162 (-)	1299	WP_342123326.1	trigger factor	-

Sequence

Protein

• Length: 411 a.a.
• Molecular weight: 45610.20 Da
• Isoelectric Point: 4.7350

>NTDB_id=792608 Q7609_RS01460 WP_005658618.1 290915..292150(-) (clpX) [Haemophilus influenzae strain 2018S05-172]
MTDKDKDLHCSFCGKEKGEVDKLIAGTGGYICNECIELCHSMLEESNDENLEESAVENKDKLPTPHEIRAHLDDYVIGQD
YAKKVLSVAVYNHYKRLRTNYESNDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVL
QKLLQNCEYDTEKAEKGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTIASIPPQGGRKHPQQEMVKLDTSK
ILFICGGAFAGLDKIIDKRTQTSTSIGFNAKVEKDEKQQSLSELFRQVEPDDLMKFGLIPEFIGRLPMIAPLSELDEDAL
IQILTKPKNALIKQYQALFGLEKVELDFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDLPSLENLQKVIVDEST
IVDNLAPKLEY

Nucleotide

• Length: 1236 bp

>NTDB_id=792608 Q7609_RS01460 WP_005658618.1 290915..292150(-) (clpX) [Haemophilus influenzae strain 2018S05-172]
ATGACAGACAAAGATAAAGATTTGCACTGCTCTTTTTGCGGAAAAGAAAAAGGCGAAGTAGATAAATTAATTGCTGGCAC
AGGCGGTTATATTTGTAATGAATGTATTGAACTTTGTCACTCAATGCTTGAAGAAAGTAATGATGAAAACCTAGAGGAAA
GTGCGGTCGAAAATAAAGATAAATTGCCAACGCCTCACGAAATTCGCGCCCATCTGGATGATTATGTTATTGGTCAAGAT
TATGCGAAAAAAGTGCTTTCTGTGGCAGTTTATAATCATTATAAACGCTTGCGAACTAACTATGAAAGCAATGATGTAGA
GCTTGGCAAAAGTAATATTTTACTTATAGGCCCTACGGGTAGCGGAAAAACGTTACTTGCACAAACATTAGCTCGTCGTT
TAAATGTACCCTTTGCGATGGCGGATGCAACCACATTAACGGAAGCTGGTTATGTGGGAGAAGATGTGGAGAATGTATTA
CAGAAACTTTTGCAAAATTGTGAATACGATACTGAAAAAGCAGAGAAAGGCATTATTTATATTGATGAAATTGATAAAAT
TAGCCGTAAATCGGAAGGCGCATCAATTACTCGAGATGTTTCAGGAGAGGGGGTGCAACAGGCTTTATTAAAACTTATTG
AAGGCACAATCGCTTCCATTCCACCTCAAGGCGGTCGTAAACATCCACAACAAGAAATGGTAAAATTGGATACGTCTAAA
ATTCTCTTTATTTGCGGCGGTGCATTTGCAGGATTAGATAAAATTATTGATAAACGCACTCAAACCAGTACGAGTATTGG
TTTTAATGCCAAAGTTGAAAAAGATGAAAAACAACAATCTCTTTCTGAATTATTCCGTCAAGTTGAACCTGATGATTTGA
TGAAATTTGGTTTAATTCCAGAATTTATCGGACGTTTGCCAATGATTGCCCCATTAAGTGAATTAGACGAAGATGCGCTG
ATACAAATTCTCACAAAACCAAAAAACGCATTAATTAAACAATATCAAGCCTTATTTGGATTGGAAAAAGTAGAATTGGA
TTTCACACCAGAAGCATTAAAAGCAATGGCGAAAAAAGCACTCGAAAGAAAAACGGGTGCGCGTGGCTTACGTTCTATCG
TAGAAGCAGTGTTGTTAGATACAATGTATGATCTACCGTCTCTTGAGAATTTACAAAAAGTTATCGTTGATGAATCGACA
ATTGTAGATAATCTTGCACCAAAATTAGAATATTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-309)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-392)

• ClpX C4-type zinc finger (zf-C4_ClpX) (8-45)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	57.843	99.27	0.574
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.138	97.08	0.535