Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxO   Type   Regulator
Locus tag   PVE41_RS00460 Genome accession   NZ_CP118438
Coordinates   131842..133335 (-) Length   497 a.a.
NCBI ID   WP_282499962.1    Uniprot ID   -
Organism   Vibrio vulnificus strain 1908-10     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context


Location: 126842..138335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PVE41_RS00445 (PVE41_00445) - 128240..129418 (-) 1179 WP_282499959.1 glycosyltransferase family 4 protein -
  PVE41_RS00450 (PVE41_00450) - 129415..130608 (-) 1194 WP_282499960.1 glycosyltransferase -
  PVE41_RS00455 (PVE41_00455) - 130716..131849 (-) 1134 WP_282499961.1 glycosyltransferase -
  PVE41_RS00460 (PVE41_00460) luxO 131842..133335 (-) 1494 WP_282499962.1 sigma-54 dependent transcriptional regulator Regulator
  PVE41_RS00465 (PVE41_00465) - 133492..135780 (-) 2289 WP_282499963.1 ATP-binding protein -
  PVE41_RS00470 (PVE41_00470) - 135804..136604 (-) 801 WP_013571856.1 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein -
  PVE41_RS00475 (PVE41_00475) - 136619..137311 (-) 693 WP_043877164.1 tyrosine-protein kinase family protein -

Sequence


Protein


Download         Length: 497 a.a.        Molecular weight: 55817.90 Da        Isoelectric Point: 6.5535

>NTDB_id=792520 PVE41_RS00460 WP_282499962.1 131842..133335(-) (luxO) [Vibrio vulnificus strain 1908-10]
MRAKVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERNTPQLVILDLKLPDMYGEDVLDWINQNDIPTAVIIA
TAHGSVDIAVSLMNKGAEDFLEKPIKADRLKTSIAVHLKRAKLEHLVENMQSRFDRPRYHGFIGACLPMQAVYKTIDSVA
PTTASVFINGESGTGKEVCAEAIHKQSLRKDQPFIAINCGAIPRDLMESEIFGHLKGAFTGATTDRKGAAMLANGGTLFL
DELCEMELEMQKKLLRFLQTGTLTPLGGSKEVKVDVRIICATNRDPLKEVEEGRFREDLYYRVHVVPIEMPPLRERGNDI
VELANHFLKTYAKEDGKKFNSISKEAQSILKKYNWPGNVRQLQNIIRNIVVLNDDNQLNVEHLPAQLTTKPQTVKEPAKL
STPPQPAQAVIHEMHNGHEALNHHSFERQTSMANPLANNAFHHSDGSIRPMWQIEREAIQNAIAFCDGNVISAAVMLELS
PSTVYRKKQAWEAEENA

Nucleotide


Download         Length: 1494 bp        

>NTDB_id=792520 PVE41_RS00460 WP_282499962.1 131842..133335(-) (luxO) [Vibrio vulnificus strain 1908-10]
ATGCGAGCAAAAGTACTGTTAGTCGAGGATTCCACTTCACTTGCCATTTTATATAAGCAATACGTCAAAGATGAGCCCTA
TGATATTTTTCACGTAGAAACCGGACGTGACGCGATTCAGTTTATTGAGCGCAATACGCCTCAACTGGTGATTTTGGATC
TCAAGTTGCCCGATATGTACGGGGAAGATGTGCTCGACTGGATCAACCAAAACGATATTCCGACCGCGGTTATCATCGCC
ACCGCTCATGGTTCCGTTGACATCGCCGTCAGCTTAATGAACAAAGGGGCGGAAGATTTTCTCGAAAAGCCAATAAAAGC
CGACCGTTTAAAAACATCCATTGCCGTTCATCTAAAGCGCGCCAAGTTAGAGCATTTGGTTGAGAACATGCAATCTCGCT
TCGACAGACCACGTTATCACGGCTTTATCGGCGCGTGCCTGCCAATGCAGGCCGTTTATAAAACCATTGATTCCGTGGCG
CCAACCACCGCCAGTGTTTTTATTAACGGAGAAAGTGGCACAGGGAAAGAAGTGTGTGCTGAAGCGATACACAAACAGAG
TCTGCGCAAAGACCAGCCCTTTATCGCAATCAACTGTGGGGCGATTCCTCGTGACTTAATGGAAAGCGAAATCTTTGGTC
ACTTAAAAGGGGCGTTTACCGGTGCGACAACCGATCGCAAAGGTGCGGCAATGCTGGCCAACGGCGGCACTTTGTTTCTC
GATGAATTGTGCGAAATGGAACTGGAGATGCAGAAAAAACTGCTGCGTTTTCTTCAGACTGGTACCTTAACCCCACTCGG
CGGCAGTAAAGAAGTCAAGGTGGATGTGCGCATCATCTGCGCCACCAATCGCGATCCCCTCAAAGAGGTCGAAGAAGGCC
GTTTTAGGGAAGATCTCTACTATCGTGTCCATGTGGTTCCCATTGAAATGCCGCCACTTAGAGAACGAGGTAATGACATT
GTTGAGCTGGCCAATCACTTCCTCAAAACTTACGCCAAAGAAGACGGCAAAAAATTCAACTCAATCAGCAAAGAAGCGCA
ATCAATACTCAAAAAATACAACTGGCCGGGCAATGTTCGTCAGTTGCAAAACATCATTCGCAACATTGTCGTTCTCAACG
ATGACAACCAACTGAATGTGGAACATTTGCCGGCTCAGCTCACCACCAAACCGCAAACCGTCAAAGAACCCGCTAAACTC
TCAACCCCACCTCAACCTGCTCAAGCGGTCATACACGAGATGCACAACGGACATGAGGCGTTAAACCATCATTCGTTTGA
AAGGCAAACGTCCATGGCCAACCCACTCGCCAACAATGCGTTCCACCATTCTGACGGCAGTATCCGTCCAATGTGGCAAA
TCGAACGCGAAGCGATTCAAAACGCCATCGCCTTTTGCGATGGCAACGTGATCAGTGCAGCGGTGATGTTGGAGCTAAGC
CCCTCGACGGTGTATCGCAAAAAACAAGCGTGGGAGGCAGAAGAAAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

50.617

97.787

0.495

  pilR Acinetobacter baumannii strain A118

36.81

98.39

0.362