Detailed information NTG0079240

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: QMM33_RS00230
• Genome accession: NZ_AP025940
• Coordinates: 39774..40667 (+)
• Length: 297 a.a.
• NCBI ID: WP_000343888.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700204
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 34774..45667

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMM33_RS00190 (PC0204_00310)	-	35087..36256 (+)	1170	WP_000366347.1	pyridoxal phosphate-dependent aminotransferase	-
QMM33_RS00195 (PC0204_00320)	recO	36253..37023 (+)	771	WP_000616162.1	DNA repair protein RecO	Machinery gene
QMM33_RS00200 (PC0204_00330)	plsX	37020..38012 (+)	993	WP_050207082.1	phosphate acyltransferase PlsX	-
QMM33_RS00205 (PC0204_00340)	-	38018..38251 (+)	234	WP_000136447.1	acyl carrier protein	-
QMM33_RS00210 (PC0204_00350)	-	38297..38587 (+)	291	Protein_34	IS5/IS1182 family transposase	-
QMM33_RS00215 (PC0204_00360)	blpU	38790..39020 (+)	231	WP_001093487.1	bacteriocin-like peptide BlpU	-
QMM33_RS00220	-	39023..39148 (+)	126	WP_000346297.1	PncF family bacteriocin immunity protein	-
QMM33_RS00225	-	39559..39753 (+)	195	WP_000756776.1	hypothetical protein	-
QMM33_RS00230 (PC0204_00370)	comR	39774..40667 (+)	894	WP_000343888.1	XRE family transcriptional regulator	Regulator
QMM33_RS00235 (PC0204_00380)	-	41197..41493 (+)	297	WP_281734509.1	uberolysin/carnocyclin family circular bacteriocin	-
QMM33_RS00240	-	41500..42636 (+)	1137	WP_000698828.1	hypothetical protein	-
QMM33_RS00245 (PC0204_00390)	-	42633..43115 (+)	483	WP_001232094.1	stage II sporulation protein M	-
QMM33_RS00250 (PC0204_00400)	-	43112..43708 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
QMM33_RS00255 (PC0204_00410)	-	43689..44180 (+)	492	WP_000671990.1	hypothetical protein	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 34517.01 Da
• Isoelectric Point: 4.6498

>NTDB_id=79240 QMM33_RS00230 WP_000343888.1 39774..40667(+) (comR) [Streptococcus pneumoniae strain PZ900700204]
MDELKREIGYKIKTIRRSCGKTQIDICGDESELTIRQLARIENGQALATLPKLLLIADKLGVSLQNIVDVKVIEIPKGFL
KLKDELIHSQTYADKGRIERKEAILEEIYENYYENLPEEEQLIVDVTQARFDIYGSSDVTYGLGLVEEYFQQLLKKKYFS
VNDLLIIELYFFCCAMGLEDKEHFEELAQKVLLCSEYEDKASLVQMEKVLLSLFIQIQTEDSLIYIQTFEKIIAKTRHVF
YRPHLFLLKAKYALFVDKNILEAESFYEKAISLAELLDDQVLVQRILAEKQIDFPTT

Nucleotide

• Length: 894 bp

>NTDB_id=79240 QMM33_RS00230 WP_000343888.1 39774..40667(+) (comR) [Streptococcus pneumoniae strain PZ900700204]
ATGGATGAGTTGAAACGTGAAATTGGTTATAAAATCAAAACTATTAGGCGATCTTGTGGAAAAACTCAGATAGATATTTG
TGGTGATGAATCAGAGTTGACGATTCGTCAGCTAGCACGTATTGAAAATGGGCAAGCTTTAGCAACACTTCCTAAATTAT
TATTGATTGCGGATAAACTTGGAGTATCATTACAGAATATTGTGGATGTTAAGGTTATAGAGATTCCAAAAGGATTCCTA
AAACTCAAAGATGAGCTGATTCATTCTCAAACCTACGCTGATAAGGGAAGAATCGAACGAAAAGAAGCTATACTTGAGGA
AATATATGAAAACTATTATGAGAATTTGCCTGAGGAAGAGCAGTTAATTGTGGATGTGACACAAGCTCGTTTTGATATTT
ATGGTAGTTCAGATGTGACCTACGGTTTAGGGTTAGTGGAAGAATATTTCCAGCAGTTATTAAAAAAGAAATATTTTTCT
GTAAATGATTTGTTGATTATTGAATTGTATTTCTTTTGTTGTGCTATGGGATTAGAAGATAAAGAACATTTTGAGGAGTT
AGCTCAAAAAGTATTGCTATGTTCAGAATATGAAGATAAGGCTAGCCTAGTTCAAATGGAAAAAGTTCTTCTGAGCCTAT
TTATCCAAATTCAGACAGAAGATAGTCTGATATATATTCAAACATTTGAGAAAATTATTGCTAAAACAAGACATGTTTTT
TACCGACCTCATCTATTTTTGCTAAAGGCAAAATATGCTTTATTTGTAGACAAGAATATTTTAGAGGCAGAAAGTTTCTA
TGAAAAGGCGATTTCTCTAGCAGAATTGCTAGACGATCAGGTATTAGTTCAGAGAATTTTAGCAGAAAAACAGATAGATT
TCCCAACAACCTGA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (76-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	36.667	100	0.37