Detailed information NTG0792349

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: Q7613_RS01570
• Genome accession: NZ_CP131720
• Coordinates: 315009..316244 (-)
• Length: 411 a.a.
• NCBI ID: WP_005658618.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain 2016N07-308
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 310009..321244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7613_RS01535 (Q7613_01535)	-	310505..311125 (-)	621	WP_011272188.1	YigZ family protein	-
Q7613_RS01540 (Q7613_01540)	tusA	311241..311480 (+)	240	WP_005665561.1	sulfurtransferase TusA	-
Q7613_RS01545 (Q7613_01545)	htpX	311522..312376 (-)	855	WP_162837812.1	protease HtpX	-
Q7613_RS01550 (Q7613_01550)	-	312541..312930 (-)	390	WP_005630808.1	RidA family protein	-
Q7613_RS01555 (Q7613_01555)	-	312987..313739 (-)	753	WP_005687850.1	VacJ family lipoprotein	-
Q7613_RS01560 (Q7613_01560)	nusG	313890..314447 (-)	558	WP_005648601.1	transcription termination/antitermination protein NusG	-
Q7613_RS01565 (Q7613_01565)	secE	314449..314865 (-)	417	WP_005658616.1	preprotein translocase subunit SecE	-
Q7613_RS01570 (Q7613_01570)	clpX	315009..316244 (-)	1236	WP_005658618.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
Q7613_RS01575 (Q7613_01575)	clpP	316254..316865 (-)	612	WP_257003823.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
Q7613_RS01580 (Q7613_01580)	tig	316958..318256 (-)	1299	WP_006995277.1	trigger factor	-

Sequence

Protein

• Length: 411 a.a.
• Molecular weight: 45610.20 Da
• Isoelectric Point: 4.7350

>NTDB_id=792349 Q7613_RS01570 WP_005658618.1 315009..316244(-) (clpX) [Haemophilus influenzae strain 2016N07-308]
MTDKDKDLHCSFCGKEKGEVDKLIAGTGGYICNECIELCHSMLEESNDENLEESAVENKDKLPTPHEIRAHLDDYVIGQD
YAKKVLSVAVYNHYKRLRTNYESNDVELGKSNILLIGPTGSGKTLLAQTLARRLNVPFAMADATTLTEAGYVGEDVENVL
QKLLQNCEYDTEKAEKGIIYIDEIDKISRKSEGASITRDVSGEGVQQALLKLIEGTIASIPPQGGRKHPQQEMVKLDTSK
ILFICGGAFAGLDKIIDKRTQTSTSIGFNAKVEKDEKQQSLSELFRQVEPDDLMKFGLIPEFIGRLPMIAPLSELDEDAL
IQILTKPKNALIKQYQALFGLEKVELDFTPEALKAMAKKALERKTGARGLRSIVEAVLLDTMYDLPSLENLQKVIVDEST
IVDNLAPKLEY

Nucleotide

• Length: 1236 bp

>NTDB_id=792349 Q7613_RS01570 WP_005658618.1 315009..316244(-) (clpX) [Haemophilus influenzae strain 2016N07-308]
ATGACAGACAAAGATAAAGATTTGCACTGCTCTTTTTGCGGAAAAGAAAAAGGCGAAGTAGATAAATTAATTGCTGGCAC
AGGCGGTTATATTTGTAATGAATGTATTGAACTTTGTCACTCAATGCTTGAAGAAAGTAATGATGAAAACCTAGAGGAAA
GTGCGGTCGAAAATAAAGATAAATTGCCAACGCCTCACGAAATTCGCGCCCATCTGGATGATTATGTTATTGGTCAAGAT
TATGCGAAAAAAGTGCTTTCTGTGGCAGTTTATAATCATTATAAACGCTTGCGAACTAACTATGAAAGCAATGATGTAGA
GCTTGGCAAAAGTAATATTTTACTTATAGGCCCTACAGGTAGCGGAAAAACGTTACTTGCGCAAACATTAGCTCGTCGTT
TAAATGTACCCTTTGCGATGGCAGATGCAACCACATTAACGGAAGCTGGTTATGTGGGAGAAGATGTAGAGAATGTATTA
CAGAAACTTTTGCAAAATTGTGAATACGATACTGAAAAAGCAGAGAAAGGCATTATTTATATTGATGAAATTGATAAAAT
TAGCCGTAAATCGGAAGGCGCATCAATTACTCGAGATGTTTCAGGAGAGGGGGTGCAACAGGCTTTATTAAAACTTATTG
AAGGTACAATAGCTTCCATTCCACCTCAAGGCGGTCGTAAACATCCACAACAAGAAATGGTAAAATTGGATACGTCTAAA
ATTCTCTTTATTTGCGGCGGTGCATTTGCAGGATTAGATAAAATTATTGATAAACGCACTCAAACCAGTACGAGTATTGG
TTTTAATGCCAAAGTTGAAAAAGATGAAAAACAACAATCTCTTTCTGAATTATTCCGTCAAGTTGAACCTGATGATTTGA
TGAAATTTGGTTTAATTCCAGAATTTATCGGACGCTTGCCAATGATTGCCCCATTAAGTGAATTAGACGAAGATGCGCTG
ATACAAATTCTCACAAAACCAAAAAACGCATTAATTAAACAATATCAAGCCTTATTTGGATTGGAAAAAGTAGAATTGGA
TTTCACACCAGAAGCATTAAAAGCAATGGCGAAAAAAGCACTTGAAAGAAAAACGGGTGCGCGTGGCTTACGTTCTATCG
TAGAAGCAGTGTTGTTAGATACAATGTATGATCTACCGTCTCTTGAGAATTTACAAAAAGTTATCGTTGATGAATCGACA
ATTGTAGATAATCTTGCGCCAAAATTAGAATATTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-309)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (315-392)

• ClpX C4-type zinc finger (zf-C4_ClpX) (8-45)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	57.843	99.27	0.574
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.138	97.08	0.535