Detailed information NTG0792155

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PV003_RS04720
• Genome accession: NZ_CP118357
• Coordinates: 955798..956901 (-)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis strain SA23
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 950798..961901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PV003_RS04695 (PV003_04715)	-	950833..951783 (+)	951	WP_005013747.1	IS481-like element IS481 family transposase	-
PV003_RS04700 (PV003_04720)	-	951777..952262 (+)	486	Protein_925	phosphonate ABC transporter ATP-binding protein	-
PV003_RS04705 (PV003_04725)	phnE	952280..953149 (+)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
PV003_RS04710 (PV003_04730)	phnE	953146..953967 (+)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
PV003_RS04715 (PV003_04740)	-	954153..955751 (+)	1599	Protein_928	CYTH and CHAD domain-containing protein	-
PV003_RS04720 (PV003_04745)	pilA	955798..956901 (-)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
PV003_RS04725 (PV003_04750)	rsmD	956977..957597 (+)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PV003_RS04730 (PV003_04755)	coaD	957618..958127 (+)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
PV003_RS04735 (PV003_04760)	-	958182..958433 (+)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
PV003_RS04740 (PV003_04765)	-	958497..959630 (+)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
PV003_RS04745 (PV003_04770)	-	959638..960024 (-)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=792155 PV003_RS04720 WP_023853086.1 955798..956901(-) (pilA) [Bordetella pertussis strain SA23]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=792155 PV003_RS04720 WP_023853086.1 955798..956901(-) (pilA) [Bordetella pertussis strain SA23]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507