Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   Q7624_RS07505 Genome accession   NZ_CP131709
Coordinates   1471453..1472130 (-) Length   225 a.a.
NCBI ID   WP_000548959.1    Uniprot ID   Q9S1K2
Organism   Streptococcus pneumoniae strain 2016S11-245     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1466453..1477130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7624_RS07475 (Q7624_07450) - 1466616..1467245 (-) 630 WP_000762091.1 NAD(P)-dependent oxidoreductase -
  Q7624_RS07480 (Q7624_07455) - 1467483..1467683 (+) 201 WP_001814296.1 hypothetical protein -
  Q7624_RS07485 (Q7624_07460) - 1468113..1468253 (+) 141 WP_000422775.1 MazG-like protein -
  Q7624_RS07490 (Q7624_07465) - 1468260..1468436 (+) 177 WP_000166031.1 MazG-like protein -
  Q7624_RS07495 (Q7624_07470) thrS 1468494..1470437 (+) 1944 WP_000608349.1 threonine--tRNA ligase -
  Q7624_RS07500 (Q7624_07475) - 1470486..1471460 (-) 975 WP_000887953.1 HAMP domain-containing histidine kinase -
  Q7624_RS07505 (Q7624_07480) braR 1471453..1472130 (-) 678 WP_000548959.1 response regulator transcription factor Regulator
  Q7624_RS07510 (Q7624_07485) - 1472286..1473359 (+) 1074 WP_001273823.1 DUF2974 domain-containing protein -
  Q7624_RS07515 (Q7624_07490) - 1473450..1473752 (-) 303 WP_000281609.1 hypothetical protein -
  Q7624_RS07520 (Q7624_07495) - 1473820..1474257 (-) 438 WP_001166785.1 Rrf2 family transcriptional regulator -
  Q7624_RS07525 (Q7624_07500) - 1474333..1475175 (-) 843 WP_000160938.1 metallophosphoesterase family protein -
  Q7624_RS07530 (Q7624_07505) - 1475287..1475937 (+) 651 WP_000188505.1 metal-dependent transcriptional regulator -
  Q7624_RS07535 - 1475918..1476109 (+) 192 WP_001816503.1 hypothetical protein -
  Q7624_RS07540 (Q7624_07510) - 1476135..1476810 (+) 676 Protein_1491 nicotinamide mononucleotide transporter -
  Q7624_RS07545 (Q7624_07520) - 1476912..1477025 (+) 114 Protein_1492 glutamine ABC transporter permease -

Sequence


Protein


Download         Length: 225 a.a.        Molecular weight: 25964.16 Da        Isoelectric Point: 5.1362

>NTDB_id=791307 Q7624_RS07505 WP_000548959.1 1471453..1472130(-) (braR) [Streptococcus pneumoniae strain 2016S11-245]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=791307 Q7624_RS07505 WP_000548959.1 1471453..1472130(-) (braR) [Streptococcus pneumoniae strain 2016S11-245]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9S1K2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471

  vicR Streptococcus mutans UA159

35.319

100

0.369