Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   PUW21_RS06230 Genome accession   NZ_CP118167
Coordinates   1205476..1206627 (+) Length   383 a.a.
NCBI ID   WP_046380934.1    Uniprot ID   A0AA96USA1
Organism   Bacillus subtilis strain 21855     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context

Location: 1200476..1211627
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS06195 (PUW21_06195) yjbB 1201147..1202364 (+) 1218 WP_080478438.1 MFS transporter -
  PUW21_RS06200 (PUW21_06200) yjbC 1202529..1203107 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  PUW21_RS06205 (PUW21_06205) spx 1203288..1203683 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  PUW21_RS06210 (PUW21_06210) yjbE 1203726..1204382 (-) 657 WP_003232944.1 TerC family protein -
  PUW21_RS06215 (PUW21_06215) - 1204552..1204692 (+) 141 WP_119122854.1 hypothetical protein -
  PUW21_RS06220 (PUW21_06220) mecA 1204659..1205315 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  PUW21_RS06225 (PUW21_06225) - 1205310..1205432 (-) 123 WP_003245684.1 hypothetical protein -
  PUW21_RS06230 (PUW21_06230) coiA 1205476..1206627 (+) 1152 WP_046380934.1 competence protein CoiA Machinery gene
  PUW21_RS06235 (PUW21_06235) pepF 1206857..1208686 (+) 1830 WP_173401378.1 oligoendopeptidase F -
  PUW21_RS06240 (PUW21_06240) - 1208724..1208891 (-) 168 WP_003244944.1 hypothetical protein -
  PUW21_RS06245 (PUW21_06245) spxH 1209205..1210104 (-) 900 WP_024573348.1 protease adaptor protein SpxH -
  PUW21_RS06250 (PUW21_06250) yjbI 1210101..1210499 (-) 399 WP_046380935.1 thiol management oxidoreductase -
  PUW21_RS06255 (PUW21_06255) cwlQ 1210754..1211488 (-) 735 WP_046380936.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 44783.89 Da        Isoelectric Point: 10.0034

>NTDB_id=790959 PUW21_RS06230 WP_046380934.1 1205476..1206627(+) (coiA) [Bacillus subtilis strain 21855]
MFSAVTEDGQLFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=790959 PUW21_RS06230 WP_046380934.1 1205476..1206627(+) (coiA) [Bacillus subtilis strain 21855]
TTGTTTAGTGCTGTGACTGAAGACGGCCAACTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTTGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(1-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.928

97.389

0.963