Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PUW21_RS06110 Genome accession   NZ_CP118167
Coordinates   1183179..1183370 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain 21855     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1178179..1188370
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW21_RS06080 (PUW21_06080) argF 1179044..1180003 (+) 960 WP_229762431.1 ornithine carbamoyltransferase -
  PUW21_RS06085 (PUW21_06085) yjzC 1180089..1180268 (+) 180 WP_003245356.1 YjzC family protein -
  PUW21_RS06090 (PUW21_06090) yjzD 1180314..1180499 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  PUW21_RS06095 (PUW21_06095) - 1180748..1181482 (+) 735 WP_032721340.1 hypothetical protein -
  PUW21_RS06100 (PUW21_06100) - 1181564..1182121 (+) 558 WP_229762430.1 hypothetical protein -
  PUW21_RS06105 (PUW21_06105) med 1182211..1183164 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  PUW21_RS06110 (PUW21_06110) comZ 1183179..1183370 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  PUW21_RS06115 (PUW21_06115) yjzB 1183400..1183639 (-) 240 WP_003232972.1 spore coat protein YjzB -
  PUW21_RS06120 (PUW21_06120) fabH 1183804..1184742 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  PUW21_RS06125 (PUW21_06125) fabF 1184765..1186006 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  PUW21_RS06130 (PUW21_06130) yjaZ 1186082..1186867 (+) 786 WP_033883592.1 DUF2268 domain-containing protein -
  PUW21_RS06135 (PUW21_06135) appD 1187059..1188045 (+) 987 WP_229762429.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=790955 PUW21_RS06110 WP_003224559.1 1183179..1183370(+) (comZ) [Bacillus subtilis strain 21855]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=790955 PUW21_RS06110 WP_003224559.1 1183179..1183370(+) (comZ) [Bacillus subtilis strain 21855]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1