Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   Q7637_RS04925 Genome accession   NZ_CP131665
Coordinates   1016210..1017196 (+) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 2010S01-051     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1011210..1022196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7637_RS04905 (Q7637_04900) trpS 1011990..1012979 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  Q7637_RS04910 (Q7637_04905) - 1013172..1014343 (-) 1172 Protein_960 IS256-like element IS256 family transposase -
  Q7637_RS04915 (Q7637_04910) spxA 1014604..1014999 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  Q7637_RS04920 (Q7637_04915) mecA 1015370..1016089 (+) 720 WP_001217728.1 adaptor protein MecA -
  Q7637_RS04925 (Q7637_04920) coiA 1016210..1017196 (+) 987 WP_000959282.1 competence protein CoiA family protein Machinery gene
  Q7637_RS04930 (Q7637_04925) pepF 1017244..1019052 (+) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  Q7637_RS04935 (Q7637_04930) yjbH 1019512..1020318 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  Q7637_RS04940 (Q7637_04935) - 1020341..1020706 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  Q7637_RS04945 (Q7637_04940) - 1020810..1021403 (-) 594 WP_000224619.1 CYTH domain-containing protein -
  Q7637_RS04950 (Q7637_04945) - 1021589..1021936 (+) 348 WP_001242103.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=790565 Q7637_RS04925 WP_000959282.1 1016210..1017196(+) (coiA) [Staphylococcus aureus strain 2010S01-051]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=790565 Q7637_RS04925 WP_000959282.1 1016210..1017196(+) (coiA) [Staphylococcus aureus strain 2010S01-051]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterProScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1
  coiA Staphylococcus aureus MW2

97.561

100

0.976