Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PUW74_RS11290 Genome accession   NZ_CP118080
Coordinates   2200680..2201453 (+) Length   257 a.a.
NCBI ID   WP_000456088.1    Uniprot ID   A0AAV3JLJ5
Organism   Streptococcus agalactiae strain VSI14     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2195680..2206453
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW74_RS11280 (PUW74_11280) rlmH 2198673..2199152 (-) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW74_RS11285 (PUW74_11285) htrA 2199353..2200582 (+) 1230 WP_000728356.1 trypsin-like peptidase domain-containing protein Regulator
  PUW74_RS11290 (PUW74_11290) spo0J 2200680..2201453 (+) 774 WP_000456088.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29237.78 Da        Isoelectric Point: 10.0836

>NTDB_id=789976 PUW74_RS11290 WP_000456088.1 2200680..2201453(+) (spo0J) [Streptococcus agalactiae strain VSI14]
MEYLETININHIAPNPYQPRLEFNTKELEELANSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQKELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=789976 PUW74_RS11290 WP_000456088.1 2200680..2201453(+) (spo0J) [Streptococcus agalactiae strain VSI14]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCAACTCTATTAAAATTAATGGGCTTATCCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCTATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTAGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAAAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.255

99.222

0.568