Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   PUW52_RS08275 Genome accession   NZ_CP118078
Coordinates   1649083..1650843 (-) Length   586 a.a.
NCBI ID   WP_024052689.1    Uniprot ID   A0A412PMS7
Organism   Streptococcus anginosus strain VSI16     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1644083..1655843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS08255 (PUW52_08255) - 1644764..1646611 (-) 1848 WP_024052684.1 APC family permease -
  PUW52_RS08260 (PUW52_08260) manA 1646878..1647822 (-) 945 WP_024052685.1 mannose-6-phosphate isomerase, class I -
  PUW52_RS08265 (PUW52_08265) - 1647853..1648579 (-) 727 Protein_1581 GntR family transcriptional regulator -
  PUW52_RS08270 (PUW52_08270) - 1648613..1648738 (-) 126 Protein_1582 PTS cellobiose transporter subunit IIC -
  PUW52_RS08275 (PUW52_08275) rcrQ 1649083..1650843 (-) 1761 WP_024052689.1 ABC transporter ATP-binding protein Regulator
  PUW52_RS08280 (PUW52_08280) rcrP 1650833..1652599 (-) 1767 WP_274984302.1 ABC transporter ATP-binding protein Regulator
  PUW52_RS08285 (PUW52_08285) - 1652592..1653050 (-) 459 WP_024052691.1 MarR family winged helix-turn-helix transcriptional regulator -
  PUW52_RS08290 (PUW52_08290) - 1653207..1653617 (-) 411 WP_024052692.1 peptide deformylase -
  PUW52_RS08295 (PUW52_08295) scrK 1653685..1654584 (-) 900 WP_024052693.1 fructokinase ScrK -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64879.90 Da        Isoelectric Point: 6.3561

>NTDB_id=789855 PUW52_RS08275 WP_024052689.1 1649083..1650843(-) (rcrQ) [Streptococcus anginosus strain VSI16]
MENKKSSLFSQVKPYLKGFQLPLLIAFVGAAVSSIITVYGPDKLKEITNLITEGMRSQIDLKSISNIALFLAILYAAGAL
LNYVQSFIISSVIQHFSKRLRTAIAEKINKLPLRYFDSHSQGDTLSRVTNDVDTVGQSLNQSLGTVISSSLLLIAVLFMM
FYNNVVLSFVTISSVLIGFVFVALIMGKSQRFFRAQQENLASVNGYVEEMYSGHNVIVSYNATDESKVAFQTLNTNLYNS
MWKSQFISGIMMPLMMFVGNFGYVMVVLVGASMALNGDVTMGTIVAFMVYVRIFSQPLSQIAQGITTLQQASAAMGRVFE
FLAESEMENDEHKAQQLTTLKGDVAFDKVFFGYNPDRTIIHDFSANAKAGQKIAIVGPTGAGKTTIVNLLMKFYEIDKGR
ITIDGVDTKQMKRSEVHDAFSMVLQDTWLFEGTIKENLIYNQKNISDEAVVAAAKAVGVHHFIKTLPKGYDTVLDDTVSL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIRNADLILVMRDGNIIEQGN
HDQLMGKNGFYADLYNSQFDEDAEYA

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=789855 PUW52_RS08275 WP_024052689.1 1649083..1650843(-) (rcrQ) [Streptococcus anginosus strain VSI16]
ATGGAAAATAAAAAATCGTCTTTATTTAGCCAAGTGAAACCTTATCTCAAAGGTTTTCAGCTTCCATTGCTCATTGCATT
TGTGGGAGCGGCAGTGTCTAGTATTATTACGGTTTATGGACCGGACAAATTAAAAGAAATTACCAACCTTATCACAGAGG
GGATGCGAAGTCAGATTGATTTGAAATCAATCTCCAACATTGCTCTTTTCTTAGCGATTTTGTACGCAGCAGGTGCTTTG
TTAAATTATGTTCAATCTTTTATCATTTCATCTGTTATTCAGCATTTCTCCAAGCGCTTGCGGACTGCTATTGCTGAAAA
AATCAATAAATTGCCTCTACGCTATTTTGACAGCCATTCCCAAGGGGACACTCTTTCACGGGTCACAAATGACGTGGATA
CTGTTGGGCAATCTTTGAACCAAAGTTTAGGAACGGTGATTTCATCAAGTTTACTGCTTATTGCGGTTCTCTTTATGATG
TTTTACAATAATGTGGTCTTGTCCTTTGTAACGATTAGCTCAGTCTTGATTGGCTTTGTCTTTGTTGCTTTGATTATGGG
AAAATCTCAACGATTCTTCCGAGCACAACAAGAAAATCTTGCCAGTGTCAATGGCTATGTGGAAGAAATGTACTCTGGGC
ATAATGTCATTGTCAGTTACAATGCCACAGACGAATCCAAAGTAGCCTTTCAAACACTTAATACTAACCTTTACAACAGT
ATGTGGAAATCACAATTCATTTCAGGGATTATGATGCCGCTTATGATGTTTGTAGGGAACTTCGGTTACGTTATGGTTGT
TTTGGTTGGAGCGAGCATGGCCTTGAATGGCGATGTCACTATGGGAACGATTGTTGCTTTTATGGTATATGTACGGATTT
TCTCTCAACCGTTGTCACAAATTGCACAAGGGATTACTACTCTTCAACAAGCTAGCGCTGCTATGGGACGCGTATTTGAA
TTTTTAGCAGAGTCTGAAATGGAAAATGATGAACACAAAGCGCAACAACTCACGACCCTAAAAGGAGATGTTGCCTTTGA
TAAGGTATTCTTTGGTTATAATCCAGATCGAACGATTATTCATGATTTCTCTGCCAATGCCAAAGCAGGGCAAAAAATTG
CCATTGTCGGTCCGACCGGTGCTGGGAAGACGACCATTGTTAACTTGCTCATGAAATTTTATGAGATTGATAAGGGACGC
ATTACAATTGACGGTGTTGATACGAAGCAAATGAAACGTTCTGAGGTACACGATGCCTTCTCCATGGTTCTCCAAGACAC
CTGGTTATTTGAGGGAACGATTAAGGAAAATTTGATTTACAATCAGAAAAATATTTCTGACGAAGCAGTTGTGGCAGCTG
CCAAAGCTGTTGGGGTTCATCACTTCATCAAGACTTTGCCAAAAGGATACGATACGGTGCTGGACGATACAGTAAGCCTT
TCTGTGGGGCAAAAGCAATTGTTGACCATTGCGCGTGCACTTCTTAAGGATGCTCCCTTACTTATCTTGGATGAAGCGAC
TTCATCTGTTGATACGCGGACAGAAGAATTGATCCAAAAAGCGATGGATAAGTTGATGGAGGGAAGGACTTCTTTCGTCA
TTGCTCACCGCTTGTCGACCATTCGTAATGCTGATTTGATTTTGGTCATGCGTGATGGTAATATCATTGAACAAGGAAAT
CACGATCAATTGATGGGAAAAAATGGCTTCTATGCTGATCTTTACAATAGTCAATTCGATGAAGACGCAGAGTATGCGTA
A

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(23-298)

ABC transporter (ABC_tran)

(361-508)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PMS7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

72.509

99.317

0.72