Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   PUW52_RS03010 Genome accession   NZ_CP118078
Coordinates   578414..580216 (+) Length   600 a.a.
NCBI ID   WP_024051953.1    Uniprot ID   A0A412PPC5
Organism   Streptococcus anginosus strain VSI16     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 573414..585216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW52_RS02990 (PUW52_02990) - 574711..575028 (+) 318 WP_021001470.1 PTS cellobiose transporter subunit IIA -
  PUW52_RS02995 (PUW52_02995) - 575051..575557 (+) 507 WP_024051956.1 hypothetical protein -
  PUW52_RS03000 (PUW52_03000) celB 575597..576940 (+) 1344 WP_024051955.1 PTS cellobiose transporter subunit IIC -
  PUW52_RS03005 (PUW52_03005) coiA 577432..578394 (+) 963 WP_274984570.1 competence protein CoiA family protein Machinery gene
  PUW52_RS03010 (PUW52_03010) pepF 578414..580216 (+) 1803 WP_024051953.1 oligoendopeptidase F Regulator
  PUW52_RS03015 (PUW52_03015) - 580218..580937 (+) 720 WP_274984571.1 O-methyltransferase -
  PUW52_RS03020 (PUW52_03020) prsA 581007..581945 (+) 939 WP_024051951.1 peptidylprolyl isomerase PrsA -
  PUW52_RS03025 (PUW52_03025) - 582083..582652 (+) 570 WP_081333904.1 LURP-one-related family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69330.28 Da        Isoelectric Point: 4.5220

>NTDB_id=789839 PUW52_RS03010 WP_024051953.1 578414..580216(+) (pepF) [Streptococcus anginosus strain VSI16]
MAKQRNEIEEKYTWDLTTIFTTDEAFEAELTQVSKELKEASSLAGHLLDSSDSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQAFAFYEPEFMAITDEQYQTFLAEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGETFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKETYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALM
KAEEVLAILGEDYLGRVKEAFSDRWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTREN
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEAFVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=789839 PUW52_RS03010 WP_024051953.1 578414..580216(+) (pepF) [Streptococcus anginosus strain VSI16]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGGACCTAACAACGATTTTCACAACAGATGAAGCTTTTGA
GGCAGAGTTAACTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCAGGGCATCTTTTGGACTCATCTGACAGCC
TTTTAAAAACAACAGAAATCCAATTGGACTTGATGCGTCGTATCGAAAAACTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATATCAAGAATACCAAGCCAAAGGAATGGCCATTTATAGTGAGTTCGGACAGGCCTTTGC
TTTTTATGAGCCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCCGAATTGCAAATCT
ATCAGCATTTCTTTGATAAGCTACTGCAAAAGAAACCTCACATCCTTTCTCAACGTGAGGAAGAATTGTTAGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGAAACTTTTGGAATCTTAGATAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAA
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATACCAACATACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCTTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTCAACAAACACTTGCCACTCTTACATCGCTACATTGCCCTACGTGCAAAGATTTTAGGCC
TTTCTGATTTGAAAATGTATGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACTTATGAGGAAGCCTTGATG
AAAGCAGAAGAAGTCTTAGCTATCCTTGGAGAAGATTATCTAGGTCGAGTAAAAGAAGCCTTTTCAGATCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGCTCTGGGGCTTATTCTGGTGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTCACGCTGGTTCATGAAACAGGTCACAGTATGCATTCTAGCTATACTCGTGAAAAT
CAGCCATACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTGACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTGGACGGTTTCCGTGGAACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAAGACAACCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTACTATGTTTTTCAATACTCAACCGGTTTCTCAGCTGCTTCTGCCTTAGCAG
ATAAGATTGTTAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTA
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTACCTCAATGCTGCTTTTGCAGTCTTTGAACGTCGTCT
TGATGAATTTGAAGCATTCGTAGAAAAGTTAGGACTGGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412PPC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.456

99.333

0.68