Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK/comK1   Type   Regulator
Locus tag   PUW68_RS08925 Genome accession   NZ_CP118060
Coordinates   1805242..1805826 (+) Length   194 a.a.
NCBI ID   WP_011276196.1    Uniprot ID   A0A2A1KAP4
Organism   Staphylococcus haemolyticus strain VSI35     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1800242..1810826
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW68_RS08895 (PUW68_08895) - 1800997..1802364 (-) 1368 WP_070678335.1 isochorismate synthase -
  PUW68_RS08900 (PUW68_08900) - 1802542..1803481 (+) 940 Protein_1723 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  PUW68_RS08905 (PUW68_08905) - 1803581..1804135 (-) 555 WP_070441287.1 GNAT family N-acetyltransferase -
  PUW68_RS08910 (PUW68_08910) - 1804321..1804551 (+) 231 WP_070441290.1 TM2 domain-containing protein -
  PUW68_RS08915 (PUW68_08915) - 1804631..1804732 (+) 102 WP_011276194.1 SAR1012 family small protein -
  PUW68_RS08920 (PUW68_08920) - 1804809..1805027 (-) 219 WP_070441293.1 IDEAL domain-containing protein -
  PUW68_RS08925 (PUW68_08925) comK/comK1 1805242..1805826 (+) 585 WP_011276196.1 competence protein ComK Regulator
  PUW68_RS08940 (PUW68_08940) - 1806406..1806957 (+) 552 WP_070441296.1 Ltp family lipoprotein -
  PUW68_RS08945 (PUW68_08945) - 1807004..1807993 (-) 990 WP_070441299.1 lipoate--protein ligase -
  PUW68_RS08950 (PUW68_08950) - 1808194..1808370 (+) 177 WP_070441302.1 DUF2187 family protein -
  PUW68_RS08955 (PUW68_08955) - 1808387..1808989 (+) 603 WP_011276203.1 CPBP family glutamic-type intramembrane protease -
  PUW68_RS08960 (PUW68_08960) - 1809073..1810584 (-) 1512 WP_070441306.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 23002.43 Da        Isoelectric Point: 9.2942

>NTDB_id=789727 PUW68_RS08925 WP_011276196.1 1805242..1805826(+) (comK/comK1) [Staphylococcus haemolyticus strain VSI35]
MTNISQSQNTVYIIRKGDMIIKPVIDDYEQTKGSEIWKYDSTIVSSPFKTQKIVERSCKFYGNSYISKKSETQRIAGITS
KPPILLTPLFPTYFFPTHSDRLEENMWINMHYVHEIKPLKNRKCKIIFANHQTLTLNVSYHSIWHQYSNCIFYYYMVDKQ
SRMKSNNPEMPIDYEKTTLNIFEALSHYSLLQDK

Nucleotide


Download         Length: 585 bp        

>NTDB_id=789727 PUW68_RS08925 WP_011276196.1 1805242..1805826(+) (comK/comK1) [Staphylococcus haemolyticus strain VSI35]
ATGACAAATATTTCTCAAAGCCAAAATACTGTATATATTATTCGAAAAGGAGATATGATAATCAAACCCGTCATTGATGA
TTATGAGCAAACAAAAGGATCTGAAATATGGAAATATGATTCTACAATAGTTTCAAGCCCATTCAAAACTCAAAAAATCG
TCGAACGCTCATGTAAATTTTATGGTAATAGCTATATTAGTAAGAAATCCGAAACACAACGAATTGCCGGCATTACTAGT
AAACCACCTATTTTATTGACTCCTCTCTTCCCCACTTATTTTTTCCCTACGCATTCAGACCGTTTAGAAGAAAACATGTG
GATTAATATGCATTATGTACATGAAATTAAGCCTCTTAAAAATCGAAAATGTAAAATTATTTTTGCAAATCATCAAACAT
TAACACTTAATGTTTCCTACCACAGTATTTGGCACCAATACTCTAACTGCATTTTTTATTATTACATGGTCGATAAACAA
TCTCGTATGAAGTCAAACAATCCAGAAATGCCAATTGATTATGAAAAAACGACTTTAAATATTTTCGAAGCACTTTCACA
TTATTCACTATTACAAGATAAATAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(11-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2A1KAP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

68.617

96.907

0.665
  comK/comK1 Staphylococcus aureus N315

68.617

96.907

0.665