Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | PUW68_RS06320 | Genome accession | NZ_CP118060 |
| Coordinates | 1258177..1259151 (+) | Length | 324 a.a. |
| NCBI ID | WP_070581607.1 | Uniprot ID | - |
| Organism | Staphylococcus haemolyticus strain VSI35 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1253177..1264151
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PUW68_RS06285 (PUW68_06285) | rpmG | 1253609..1253758 (+) | 150 | WP_011275661.1 | 50S ribosomal protein L33 | - |
| PUW68_RS06290 (PUW68_06290) | - | 1253995..1254531 (+) | 537 | WP_070581602.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| PUW68_RS06295 (PUW68_06295) | - | 1254547..1256004 (+) | 1458 | WP_070581603.1 | rhomboid family intramembrane serine protease | - |
| PUW68_RS06300 (PUW68_06300) | - | 1255988..1256191 (+) | 204 | WP_070581604.1 | YqgQ family protein | - |
| PUW68_RS06305 (PUW68_06305) | - | 1256188..1257174 (+) | 987 | WP_070581605.1 | ROK family glucokinase | - |
| PUW68_RS06310 (PUW68_06310) | - | 1257174..1257497 (+) | 324 | WP_011275666.1 | MTH1187 family thiamine-binding protein | - |
| PUW68_RS06315 (PUW68_06315) | - | 1257499..1258125 (+) | 627 | WP_070581606.1 | MBL fold metallo-hydrolase | - |
| PUW68_RS06320 (PUW68_06320) | comGA | 1258177..1259151 (+) | 975 | WP_070581607.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| PUW68_RS06325 (PUW68_06325) | comGB | 1259123..1260187 (+) | 1065 | WP_070581608.1 | competence type IV pilus assembly protein ComGB | - |
| PUW68_RS06330 (PUW68_06330) | comGC | 1260201..1260521 (+) | 321 | WP_011275670.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| PUW68_RS06335 (PUW68_06335) | comGD | 1260586..1260954 (+) | 369 | WP_240565900.1 | competence type IV pilus minor pilin ComGD | - |
| PUW68_RS06340 (PUW68_06340) | - | 1260935..1261234 (+) | 300 | WP_011275672.1 | hypothetical protein | - |
| PUW68_RS06345 (PUW68_06345) | - | 1261392..1261643 (+) | 252 | WP_240556425.1 | hypothetical protein | - |
| PUW68_RS06350 (PUW68_06350) | - | 1261803..1262321 (+) | 519 | WP_070581611.1 | shikimate kinase | - |
| PUW68_RS06355 (PUW68_06355) | gcvT | 1262511..1263602 (+) | 1092 | WP_070581612.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37147.08 Da Isoelectric Point: 8.4429
>NTDB_id=789720 PUW68_RS06320 WP_070581607.1 1258177..1259151(+) (comGA) [Staphylococcus haemolyticus strain VSI35]
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF
MKLLFREIVNKAISKNASDIHFIPSVDEVHIKFRINDYLELYEIFNLDVYQKLLVFMKFKSGLDVSSQQSAQSGRYTYQS
KSTFYLRISTLPLSLGVESCVIRIIPQYFQAKKEYKEFNDFKHLVNKKQGLILLTGPTGSGKSTLMYQMVLHAYKELNLN
VITIENPVEQLLKGITQISINKKAGIDYISSFKAILRCDPDIILIGEIRDAEVAKCVIQASLSGHLVLSTMHSTNCRGAL
LRLLEMGISIQELTQSINIISNQRLITTTQNERRLICETIDKKQIQYFFEHEQTMPHNFNNLEQQLNLLSKEGTICEDTA
SKYF
Nucleotide
Download Length: 975 bp
>NTDB_id=789720 PUW68_RS06320 WP_070581607.1 1258177..1259151(+) (comGA) [Staphylococcus haemolyticus strain VSI35]
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGATGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCCTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACCTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
TTGAAACTATTATTCAGAGAGATAGTTAATAAAGCTATTTCAAAAAATGCGAGCGACATACATTTTATCCCTTCAGTTGA
TGAAGTTCATATTAAATTTAGAATTAATGATTATCTTGAACTTTATGAAATATTCAACTTAGATGTATATCAAAAATTAT
TAGTATTTATGAAGTTCAAATCAGGTTTGGATGTTTCATCTCAACAATCCGCTCAAAGTGGTCGTTATACTTATCAATCT
AAATCTACTTTTTATTTACGGATTTCAACATTACCTTTGTCCTTAGGTGTAGAAAGTTGTGTAATTAGGATAATTCCTCA
ATATTTTCAAGCAAAAAAAGAATATAAAGAATTTAACGATTTTAAACACCTAGTAAATAAAAAACAGGGATTAATTCTAT
TAACTGGACCCACAGGATCCGGAAAAAGTACTCTGATGTATCAAATGGTTCTACATGCATATAAAGAATTAAATCTTAAT
GTTATCACTATCGAAAACCCAGTTGAGCAATTACTAAAAGGCATTACCCAAATATCAATAAATAAAAAGGCAGGTATAGA
CTACATAAGTTCATTTAAAGCTATATTAAGATGTGATCCTGATATTATTTTAATAGGTGAAATAAGAGACGCAGAAGTTG
CTAAATGTGTTATTCAAGCTAGTTTGAGTGGACACCTTGTATTATCAACCATGCATTCTACTAATTGTAGAGGTGCATTA
CTTCGATTACTTGAGATGGGAATTTCAATTCAAGAATTAACTCAATCTATCAATATCATTTCTAATCAAAGATTAATAAC
GACTACTCAGAATGAGCGTCGCTTAATTTGTGAAACAATAGATAAAAAGCAGATACAATATTTCTTCGAGCATGAACAAA
CAATGCCACATAATTTTAATAATTTAGAACAGCAATTAAATTTATTATCTAAAGAAGGAACAATTTGTGAAGATACTGCA
AGTAAATATTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
65.944 |
99.691 |
0.657 |
| comGA | Staphylococcus aureus N315 |
65.944 |
99.691 |
0.657 |