Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PUW49_RS10930 Genome accession   NZ_CP118054
Coordinates   2137332..2138099 (+) Length   255 a.a.
NCBI ID   WP_070672281.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI37     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2132332..2143099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW49_RS10900 (PUW49_10900) comE 2132894..2133643 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  PUW49_RS10905 (PUW49_10905) comD/comD2 2133643..2134968 (-) 1326 WP_207047776.1 GHKL domain-containing protein Regulator
  PUW49_RS10910 (PUW49_10910) - 2134986..2135132 (-) 147 WP_003029519.1 bacteriocin -
  PUW49_RS10920 (PUW49_10920) rlmH 2135414..2135893 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PUW49_RS10925 (PUW49_10925) htrA 2136087..2137277 (+) 1191 WP_024052475.1 trypsin-like peptidase domain-containing protein Regulator
  PUW49_RS10930 (PUW49_10930) spo0J 2137332..2138099 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29588.08 Da        Isoelectric Point: 9.3660

>NTDB_id=789698 PUW49_RS10930 WP_070672281.1 2137332..2138099(+) (spo0J) [Streptococcus anginosus strain VSI37]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=789698 PUW49_RS10930 WP_070672281.1 2137332..2138099(+) (spo0J) [Streptococcus anginosus strain VSI37]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTACATTCCCAACAGACAAAAACTGTAACAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.51

100

0.545