Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   PUW49_RS03385 Genome accession   NZ_CP118054
Coordinates   654956..656758 (+) Length   600 a.a.
NCBI ID   WP_274995018.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI37     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 649956..661758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW49_RS03365 (PUW49_03365) - 651252..651569 (+) 318 WP_021001470.1 PTS cellobiose transporter subunit IIA -
  PUW49_RS03370 (PUW49_03370) - 651592..652098 (+) 507 WP_024051956.1 hypothetical protein -
  PUW49_RS03375 (PUW49_03375) celB 652138..653481 (+) 1344 WP_264349101.1 PTS cellobiose transporter subunit IIC -
  PUW49_RS03380 (PUW49_03380) coiA 653973..655004 (+) 1032 WP_024051954.1 competence protein CoiA family protein Machinery gene
  PUW49_RS03385 (PUW49_03385) pepF 654956..656758 (+) 1803 WP_274995018.1 oligoendopeptidase F Regulator
  PUW49_RS03390 (PUW49_03390) - 656760..657443 (+) 684 WP_024051952.1 O-methyltransferase -
  PUW49_RS03395 (PUW49_03395) prsA 657550..658488 (+) 939 WP_024051951.1 peptidylprolyl isomerase PrsA -
  PUW49_RS03400 (PUW49_03400) - 658626..659195 (+) 570 WP_081333904.1 LURP-one-related family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69341.36 Da        Isoelectric Point: 4.5415

>NTDB_id=789665 PUW49_RS03385 WP_274995018.1 654956..656758(+) (pepF) [Streptococcus anginosus strain VSI37]
MAKQRNEIEEKYTWNLTTIFTTDEAFEAELTQVSKELKEASSLAGHLLDSSDSLLKTTEIQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMAIYSEFGQAFAFYEPEFMAITDEQYQTFLAEKPELQIYQHFFDKLLQKKPHILSQREEELLAGA
GEIFSAAGETFGILDNADIVFPTVHDEEGNEVQLTHGNYISLVESKNRTVRKETYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRNFSSAREAALSANFIPESVYDSLVSAVNKHLPLLHRYIALRAKILGLSDLKMYDLYTPLSEADYKFTYEEALM
KAEEVLAILGEDYLGRVKEAFSDRWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNLFTLVHETGHSMHSSYTREN
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVDDDQTRFAILNHFLDCFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNDLYADLNEKYYGLTKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALADKIVNGTQEDKEKYLNYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=789665 PUW49_RS03385 WP_274995018.1 654956..656758(+) (pepF) [Streptococcus anginosus strain VSI37]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATACACTTGGAACCTAACAACGATTTTCACAACAGATGAAGCTTTTGA
GGCAGAGTTAACTCAAGTTTCAAAAGAATTAAAAGAAGCCAGCAGCTTAGCAGGGCATCTTTTGGACTCATCTGACAGCC
TTTTAAAAACAACAGAAATCCAATTGGACTTGATGCGTCGTATCGAAAAACTCTATTCCTATGCTCACATGAAAAATGAC
CAAGATACGCGCGTGGCAAAATATCAAGAATACCAAGCCAAAGGAATGGCCATTTATAGTGAGTTCGGACAGGCCTTTGC
TTTTTATGAGCCAGAATTTATGGCAATCACAGACGAGCAATATCAGACTTTCTTAGCTGAAAAGCCCGAATTGCAAATCT
ATCAGCATTTCTTTGATAAGCTACTGCAAAAGAAACCTCACATCCTTTCTCAACGTGAGGAAGAATTGTTAGCAGGAGCT
GGTGAAATTTTTAGTGCTGCGGGTGAAACTTTTGGAATCTTAGATAATGCTGATATTGTCTTTCCAACCGTGCACGACGA
AGAAGGAAATGAAGTGCAATTGACGCACGGAAATTACATTAGTTTAGTGGAGTCGAAAAATCGTACAGTCCGCAAGGAAA
CTTATGAAGCGCTTTACAGCGTCTATGAGCAATACCAACATACTTATGCTAAGACACTCCAAACGAATGTTAAAGTTCAT
AATTACAATGCCAAAGTTCGTAATTTTTCTTCTGCGCGTGAAGCTGCTTTGTCTGCTAACTTTATTCCAGAAAGTGTTTA
TGATAGCTTAGTGTCTGCGGTCAACAAACACTTGCCACTCTTACATCGCTACATTGCCCTACGTGCAAAGATTTTAGGCC
TTTCTGATTTGAAAATGTATGACCTCTATACACCATTGTCAGAAGCAGATTACAAATTTACTTATGAGGAAGCCTTGATG
AAAGCAGAAGAAGTCTTAGCTATCCTTGGAGAAGATTATCTAGGTCGAGTAAAAGAAGCCTTTTCAGATCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGCTCTGGGGCTTATTCTGGTGGTTCTTACGATACCAATGCTTTTATGTTGCTCAACT
GGCAAGATACGTTGGACAATCTTTTCACGCTGGTTCATGAAACAGGTCACAGTATGCATTCTAGCTATACTCGTGAAAAT
CAGCCATACGTTTACGGAGATTATTCTATTTTCTTAGCTGAGATTGCTTCTACGACCAATGAAAATATCCTGACGGAGAA
ATTATTGGAAGAAGTAGATGACGATCAAACCCGCTTTGCGATTCTGAATCATTTCTTGGACTGTTTCCGTGGAACTGTTT
TCCGCCAAACTCAATTTGCCGAGTTTGAACATGCCATTCACAAAGCTGACCAAGAAGGTCAAGTCTTGACGAGTGAATTT
TTGAATGATTTGTACGCAGATTTGAATGAAAAATATTATGGTTTGACGAAAGAAGACAACCCACAAATTCAATACGAATG
GGCACGGATTCCGCATTTCTACTATGATTACTATGTTTTTCAATACTCAACCGGTTTCTCAGCTGCTTCTGCCTTAGCAG
ATAAGATTGTTAACGGAACGCAAGAAGATAAAGAGAAGTATCTCAACTACTTGAAAGCAGGAAATTCTGATTATCCGCTA
AATGTCATTAAAAAAGCTGGTGTAGATATGGAAAAAGAAGACTACCTCAATGCTGCTTTTGCAGTCTTTGAACGTCGTCT
TGATGAATTTGAAGCACTCGTAGAAAAGTTAGGACTGGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.289

99.333

0.678