Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   PUW71_RS01685 Genome accession   NZ_CP118053
Coordinates   312240..313286 (+) Length   348 a.a.
NCBI ID   WP_024052173.1    Uniprot ID   A0A412PNT0
Organism   Streptococcus anginosus strain VSI40     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 307240..318286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW71_RS01655 (PUW71_01655) tsaE 308612..309052 (+) 441 WP_274997875.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PUW71_RS01660 (PUW71_01660) - 309045..309566 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  PUW71_RS01665 (PUW71_01665) - 309574..310689 (+) 1116 WP_070241538.1 LCP family protein -
  PUW71_RS01670 (PUW71_01670) - 310736..311023 (-) 288 WP_024052176.1 hypothetical protein -
  PUW71_RS01675 (PUW71_01675) - 311033..311443 (-) 411 WP_024052175.1 HIT family protein -
  PUW71_RS01680 (PUW71_01680) pptA 311512..312243 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  PUW71_RS01685 (PUW71_01685) pptB 312240..313286 (+) 1047 WP_024052173.1 ABC transporter permease Regulator
  PUW71_RS01690 (PUW71_01690) - 313337..314134 (+) 798 WP_070241539.1 phosphotransferase family protein -
  PUW71_RS01695 (PUW71_01695) trmB 314131..314766 (+) 636 WP_070815202.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PUW71_RS01700 (PUW71_01700) - 315395..316084 (+) 690 WP_070815205.1 VIT family protein -
  PUW71_RS01705 (PUW71_01705) rimP 316353..316823 (+) 471 WP_306806730.1 ribosome maturation factor RimP -
  PUW71_RS01710 (PUW71_01710) nusA 316872..318065 (+) 1194 WP_042754019.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 41091.50 Da        Isoelectric Point: 10.4750

>NTDB_id=789587 PUW71_RS01685 WP_024052173.1 312240..313286(+) (pptB) [Streptococcus anginosus strain VSI40]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWVLLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=789587 PUW71_RS01685 WP_024052173.1 312240..313286(+) (pptB) [Streptococcus anginosus strain VSI40]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAATTTTCCTAAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTCTGTTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGTCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGTTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACTAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCCAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGCTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.563

100

0.486

  pptB Streptococcus salivarius strain HSISS4

47.701

100

0.477