Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   PUW62_RS02055 Genome accession   NZ_CP118046
Coordinates   408527..409573 (+) Length   348 a.a.
NCBI ID   WP_274997296.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI52     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 403527..414573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW62_RS02025 (PUW62_02025) tsaE 404899..405339 (+) 441 WP_024052179.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  PUW62_RS02030 (PUW62_02030) - 405332..405853 (+) 522 WP_024052178.1 GNAT family N-acetyltransferase -
  PUW62_RS02035 (PUW62_02035) - 405861..406976 (+) 1116 WP_024052177.1 LCP family protein -
  PUW62_RS02040 (PUW62_02040) - 407023..407310 (-) 288 WP_024052176.1 hypothetical protein -
  PUW62_RS02045 (PUW62_02045) - 407320..407730 (-) 411 WP_024052175.1 HIT family protein -
  PUW62_RS02050 (PUW62_02050) pptA 407799..408530 (+) 732 WP_024052174.1 ABC transporter ATP-binding protein Regulator
  PUW62_RS02055 (PUW62_02055) pptB 408527..409573 (+) 1047 WP_274997296.1 ABC transporter permease Regulator
  PUW62_RS02060 (PUW62_02060) - 409624..410421 (+) 798 WP_070241539.1 phosphotransferase family protein -
  PUW62_RS02065 (PUW62_02065) trmB 410418..411053 (+) 636 WP_003033795.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  PUW62_RS02070 (PUW62_02070) - 411682..412371 (+) 690 WP_042754037.1 VIT family protein -
  PUW62_RS02075 (PUW62_02075) rimP 412640..413110 (+) 471 WP_306806738.1 ribosome maturation factor RimP -
  PUW62_RS02080 (PUW62_02080) nusA 413159..414352 (+) 1194 WP_042754019.1 transcription termination factor NusA -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 41092.45 Da        Isoelectric Point: 10.3798

>NTDB_id=789453 PUW62_RS02055 WP_274997296.1 408527..409573(+) (pptB) [Streptococcus anginosus strain VSI52]
MRNLFQKRRQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPENHLPIILALVVLLFLLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQEQTRLSYRLWVLLQTVVLLLLVPLFLALGMPLWGWFILVFLMLIAKWFVFLQKSQKFYQGAG
VNWSYLIAYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNIYLRSYLRNGDFLALTIRLLFLS
LLGIGFISQSWIAAIFVALLNYLLLFQLTALYNAFDYQYLTFLFPLETGLKLKGVKQVIILIGYSVLFVETMMALLFFQD
RVALLFMIGITLLLYFIYLPFKLRSLVD

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=789453 PUW62_RS02055 WP_274997296.1 408527..409573(+) (pptB) [Streptococcus anginosus strain VSI52]
ATGAGAAATCTGTTTCAAAAGCGCAGGCAAGTATTTCGCAATCAATGTTTGAAGTATTCACGCTATGTTTTTAATGACCA
TTTTGTCCTCTTTTTATTGGTCTTTATTGGCTTTTTAGCTGTTCAATACAGTCAACTGTTACGAAATTTTCCTGAAAATC
ACCTGCCAATCATTCTTGCTTTAGTGGTTCTTTTGTTCTTATTATTGCCTTTGGGACGAATCGCGACTTATATGGAAAAA
CCAGATAGTCTGTTTTTATTGGTCAAAGAAGAGGAATTAAAAAGCTACCTACAAGAACAAACGCGTTTATCTTATCGATT
ATGGGTCTTGCTTCAAACCGTTGTGTTGTTACTATTAGTACCGCTTTTTCTTGCCTTAGGCATGCCGCTTTGGGGCTGGT
TTATTCTTGTTTTTCTTATGTTGATAGCAAAATGGTTCGTATTTTTGCAGAAAAGTCAAAAATTTTACCAAGGTGCAGGG
GTGAATTGGAGTTATCTCATTGCTTATGAAGAAAGACGTAAGCAGACAATCCTACGTTTCTTTGCTCTCTTTACCAATGT
CAAAGGAATTTCTAATAGTGTGAAACGCCGTGCGTATCTTGATGGTTTGACAAATATTCTACCCAAAAGACAGTCAACTA
CTTGGCAAAATATATATTTGCGTTCTTATTTACGAAATGGTGATTTTCTGGCCTTGACTATACGGTTGCTGTTTCTGTCT
CTTTTGGGAATTGGCTTTATCAGTCAATCATGGATTGCGGCTATTTTCGTGGCTTTGTTGAATTATCTCTTGCTATTTCA
GTTGACAGCCTTGTACAATGCTTTTGATTATCAATATTTGACGTTCTTATTTCCTTTGGAAACTGGATTGAAATTAAAAG
GAGTGAAACAAGTGATTATTCTTATTGGCTACAGCGTGCTTTTTGTGGAAACAATGATGGCTTTGTTGTTTTTCCAAGAT
AGAGTAGCTTTGCTTTTTATGATTGGAATTACATTGCTACTTTATTTCATCTATTTACCATTTAAATTAAGAAGTTTGGT
TGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

48.276

100

0.483

  pptB Streptococcus salivarius strain HSISS4

47.414

100

0.474