Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   PUW70_RS03680 Genome accession   NZ_CP118029
Coordinates   728266..729618 (+) Length   450 a.a.
NCBI ID   WP_274996240.1    Uniprot ID   -
Organism   Streptococcus anginosus strain VSI68     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 723266..734618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUW70_RS03655 (PUW70_03655) ccpA 723513..724517 (+) 1005 WP_024051861.1 catabolite control protein A Regulator
  PUW70_RS03660 (PUW70_03660) - 724610..725608 (+) 999 WP_024051860.1 glycosyltransferase -
  PUW70_RS03665 (PUW70_03665) - 725610..726923 (+) 1314 WP_101750292.1 glycosyltransferase family 4 protein -
  PUW70_RS03670 (PUW70_03670) - 726950..727291 (+) 342 WP_070584168.1 hypothetical protein -
  PUW70_RS03675 (PUW70_03675) micA 727572..728273 (+) 702 WP_003025150.1 response regulator YycF Regulator
  PUW70_RS03680 (PUW70_03680) micB 728266..729618 (+) 1353 WP_274996240.1 cell wall metabolism sensor histidine kinase VicK Regulator
  PUW70_RS03685 (PUW70_03685) vicX 729620..730423 (+) 804 WP_024051857.1 MBL fold metallo-hydrolase Regulator
  PUW70_RS03690 (PUW70_03690) - 730502..730771 (+) 270 Protein_688 YbaN family protein -
  PUW70_RS03695 (PUW70_03695) rnc 731152..731850 (+) 699 WP_274996243.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51376.62 Da        Isoelectric Point: 4.6876

>NTDB_id=789246 PUW70_RS03680 WP_274996240.1 728266..729618(+) (micB) [Streptococcus anginosus strain VSI68]
MIDNIRQFIVSKDFVFVLLILGFILVITLLSLENRRDNIRIRQLNQKVKDLIAGNYSEILDVQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESEARKMNILKLLDIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSIW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTDTQMILSISDEGLGIPKKDIPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDELEG

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=789246 PUW70_RS03680 WP_274996240.1 728266..729618(+) (micB) [Streptococcus anginosus strain VSI68]
ATGATTGATAATATTAGACAATTTATTGTATCAAAAGACTTTGTATTTGTTTTACTTATTTTAGGGTTCATCTTGGTGAT
TACCTTGCTTTCCTTGGAAAATAGGCGAGACAATATTCGTATTCGCCAATTGAATCAAAAAGTAAAAGATTTAATTGCAG
GCAATTACTCAGAAATTTTAGATGTACAAGGTGGTCCAGAAATTACGGATATTACCAATAGTATCAATGATTTATCTGAG
GTAATCCGTCTAACGCATGAAAATTTAGAGCAAGAAACTAAGCGCCTGTCGAGTATTTTATCCTATATGACGGACGGTGT
TCTTGCGACCAATCGTCGTGGGCAGATTATCATGATCAATGATATGGCAACCAAGCAGTTGGGGGTCAAAGAGTCTGAAG
CACGAAAGATGAATATCTTAAAACTGTTGGATATCGAAGACGAATATGACTTACGAGACTTGATTACGAAAGTTCCAGAG
TTGACCATTGATTCGCAGGATGAAAATGGAGAGTTTTTAAGTTTACGTGTCCGATTTGCCTTGATTCGGCGAGAATCAGG
CTTTATTTCAGGGCTGGTTGCAGTGCTACACGATACAACGGAGCAGGAAAAAGAAGAGCGTGAGCGGAGACTGTTTGTTT
CGAATGTCAGTCACGAATTACGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCACTAGATGAAGGTGCCTTATCA
GAACCAGTCGCACCGGATTTCATCAAGGTTTCATTAGACGAGACCAATCGGATGATGCGCATGGTTTCGGACTTGCTGAG
TTTGTCACGTATTGACAATGCAACCAGTCATTTGGATATTGAATTGACGAATTTTACAGCTTTTATCACCTTTATTTTGA
ACCGTTTTGATAAAATCAGAAGCCAGAATGATGATAAAAAGTATGAAATTATACGAGATTATCCGATTAACTCTATTTGG
GTCGAAATTGATACAGATAAGATGACACAGGTGATTGATAATATTATCAACAATGCCATTAAATATTCTCCTGACGGTGG
CAAGATTACGGTCAGTATGAAAACGACGGATACCCAAATGATTTTGTCGATTTCAGATGAAGGCTTAGGAATTCCTAAAA
AAGATATACCGAAAATTTTTGATAGATTTTATCGTGTAGATAAAGCGAGAAGTCGTGCACAAGGTGGGTCCGGACTGGGC
TTAGCCATTGCCAAAGAGATTATCAAGCAGCATAACGGCTTTATCTGGGCAAAGAGCGAGTACGGCAAAGGTTCAACCTT
TACTATTGTCCTGCCTTATGATAAGGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGAATTAGAAGGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

80.866

97.556

0.789

  vicK Streptococcus mutans UA159

71.638

90.889

0.651