Detailed information NTG0789158

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: PT671_RS11705
• Genome accession: NZ_CP118021
• Coordinates: 2367204..2368349 (-)
• Length: 381 a.a.
• NCBI ID: WP_003222022.1
• Uniprot ID: -
• Organism: Bacillus spizizenii strain B-354
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2362204..2373349

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT671_RS11685	-	2362908..2364983 (-)	2076	WP_003222029.1	transglycosylase domain-containing protein	-
PT671_RS11690	speE	2365185..2366015 (+)	831	WP_003222027.1	spermidine synthase	-
PT671_RS11695	speB	2366076..2366948 (+)	873	WP_003222025.1	agmatinase	-
PT671_RS11700	phrF	2367101..2367220 (-)	120	WP_003222023.1	phosphatase RapF inhibitor PhrF	Regulator
PT671_RS11705	rapF	2367204..2368349 (-)	1146	WP_003222022.1	response regulator aspartate phosphatase RapF	Regulator
PT671_RS11710	-	2368576..2369931 (+)	1356	WP_003222017.1	YncE family protein	-
PT671_RS21515	-	2369943..2370062 (+)	120	Protein_2264	hypothetical protein	-
PT671_RS11715	albG	2370068..2370769 (-)	702	WP_003222015.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
PT671_RS11720	-	2370766..2372049 (-)	1284	WP_003222013.1	M16 family metallopeptidase	-
PT671_RS11725	-	2372054..2373214 (-)	1161	WP_079996665.1	insulinase family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45659.13 Da
• Isoelectric Point: 5.5270

>NTDB_id=789158 PT671_RS11705 WP_003222022.1 2367204..2368349(-) (rapF) [Bacillus spizizenii strain B-354]
MTGVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAKAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHAYHSKGMAYSQKAGDSIYLSEFEFLKSLYLSGPDEEAI
QRFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=789158 PT671_RS11705 WP_003222022.1 2367204..2368349(-) (rapF) [Bacillus spizizenii strain B-354]
GTGACAGGTGTCATATCTTCTTCTTCCGTCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGAAGAGAAATCAAACAAGAGCTGGATCAAATGGAAGAAGACCAAGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCACTAGAGAAAATGCGGATCGAGGAACAGCCGAGA
TTGTCAGATTTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
AGGCATGTATGAGCTAGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTTAAAAAGGCCGAAAGCAAGTTGATATTTG
TTAAGGATCGAATAGAGAAGGCAGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCTTACAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCTACCAATTTCTTAGATTTAAAACAATATGAGGATGCCATCTCACATTTTAAAAAAGCTTACTCTATGGCGAAAG
CTGAGAATCAGCCCCAATTAATGGGGAGAACATTGTACAACATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAGGAATCTAACATTCTTCCTTCCCTGCCCCAAGCCTATTTTTT
AATTACACAAATTCATTATAAATTGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATGGCTTATTCTCAAA
AGGCCGGAGATTCAATCTATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGGTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCATGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCCTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	96.063	100	0.961
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575