Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | PT671_RS09285 | Genome accession | NZ_CP118021 |
| Coordinates | 1890193..1892625 (-) | Length | 810 a.a. |
| NCBI ID | WP_003225731.1 | Uniprot ID | G4NQC0 |
| Organism | Bacillus spizizenii strain B-354 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1885193..1897625
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PT671_RS09260 | ispF | 1885243..1885719 (-) | 477 | WP_003225745.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| PT671_RS09265 | ispD | 1885712..1886410 (-) | 699 | WP_003225740.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| PT671_RS09270 | - | 1886425..1887525 (-) | 1101 | WP_003225738.1 | PIN/TRAM domain-containing protein | - |
| PT671_RS09275 | disA | 1887639..1888721 (-) | 1083 | WP_003225736.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| PT671_RS09280 | radA | 1888725..1890101 (-) | 1377 | WP_003225734.1 | DNA repair protein RadA | Machinery gene |
| PT671_RS09285 | clpC | 1890193..1892625 (-) | 2433 | WP_003225731.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| PT671_RS09290 | - | 1892622..1893713 (-) | 1092 | WP_003225728.1 | protein arginine kinase | - |
| PT671_RS09295 | mcsA | 1893713..1894270 (-) | 558 | WP_003225726.1 | protein-arginine kinase activator protein McsA | - |
| PT671_RS09300 | ctsR | 1894284..1894748 (-) | 465 | WP_003225724.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90063.57 Da Isoelectric Point: 6.1203
>NTDB_id=789150 PT671_RS09285 WP_003225731.1 1890193..1892625(-) (clpC) [Bacillus spizizenii strain B-354]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSATGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=789150 PT671_RS09285 WP_003225731.1 1890193..1892625(-) (clpC) [Bacillus spizizenii strain B-354]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAGGCACTCCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGAATTGCTGCTAAAGCTCTACAAGCGCTTG
GGCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCTAGAAAACTCGGGCATTCTTATGTCGGGACAGAACA
TATTCTTCTTGGTTTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGAGTGCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCTAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGTAA
GGAAATTCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTAATG
ACATTAGATATGGGAACAGTTGTTGCCGGTACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTTATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTTCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGACGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGCGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAAAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTCATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCGAGAGCAGGATTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTGGCGCGAGCACTTGCTGAA
TCCATTTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCATCCTGATGTCTTCAATATCCTCCTGCAAGTTCTTGAAGACGGACGATTAACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGCGCGTTCAGACCGGAGTTTATCAACCGGATCGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTCACT
GAAATCGTGTCATTGATGTCTGATCAATTAACAAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCCGAGGGAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAG
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAGGCACTCCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGAATTGCTGCTAAAGCTCTACAAGCGCTTG
GGCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAAAGTTTGATCGGTCGCGGGCAGGAAATGTCTCAAACGATTCATTAC
ACTCCTAGAGCTAAGAAAGTCATTGAGCTTTCAATGGATGAGGCTAGAAAACTCGGGCATTCTTATGTCGGGACAGAACA
TATTCTTCTTGGTTTGATTCGCGAAGGTGAAGGTGTTGCTGCGAGAGTGCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGACAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCTAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTAATCGGCAGAAGTAA
GGAAATTCAGCGTGTGATCGAAGTGTTAAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGTGAACCAGGTGTAGGTA
AAACGGCTATCGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTGCGCGATAAACGCGTAATG
ACATTAGATATGGGAACAGTTGTTGCCGGTACAAAATACCGCGGTGAATTTGAGGATCGCCTGAAAAAAGTTATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTTCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGACGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGACCGATATGAAGCTCACCACCGCGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTAATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAAAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGGCAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTCATCGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCGAGAGCAGGATTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTTGGTAAAACAGAGCTGGCGCGAGCACTTGCTGAA
TCCATTTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCATCCTGATGTCTTCAATATCCTCCTGCAAGTTCTTGAAGACGGACGATTAACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTCTGATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGCGCGTTCAGACCGGAGTTTATCAACCGGATCGATGAAATCATTGTCTTCCATTCACTTGAGAAAAAACATCTCACT
GAAATCGTGTCATTGATGTCTGATCAATTAACAAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACCGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCCGAGGGAATATTCATAAAGGACAGCATATCGTTCTCGATGTAGAAGACGGCGAG
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.259 |
100 |
0.993 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.374 |
99.012 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.117 |
99.877 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae Rx1 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae D39 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae R6 |
53.612 |
76.914 |
0.412 |