Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   PT671_RS07880 Genome accession   NZ_CP118021
Coordinates   1626246..1626644 (+) Length   132 a.a.
NCBI ID   WP_003224919.1    Uniprot ID   E0U2B3
Organism   Bacillus spizizenii strain B-354     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1621246..1631644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PT671_RS07855 hxlR 1621976..1622338 (-) 363 WP_003224931.1 transcriptional activator HxlR -
  PT671_RS07860 hxlA 1622569..1623201 (+) 633 WP_003224929.1 3-hexulose-6-phosphate synthase -
  PT671_RS07865 hxlB 1623206..1623763 (+) 558 WP_003224927.1 6-phospho-3-hexuloisomerase -
  PT671_RS07870 tlpC 1623876..1625600 (+) 1725 WP_003224925.1 methyl-accepting chemotaxis protein TlpC -
  PT671_RS07875 nucA/comI 1625774..1626223 (+) 450 WP_136975843.1 DNA-entry nuclease Machinery gene
  PT671_RS07880 nin/comJ 1626246..1626644 (+) 399 WP_003224919.1 DNA-entry nuclease inhibitor Regulator
  PT671_RS07885 bglC 1626681..1628114 (-) 1434 WP_003224917.1 6-phospho-beta-glucosidase -
  PT671_RS07890 - 1628187..1628915 (-) 729 WP_003224881.1 AAA family ATPase -
  PT671_RS07895 - 1628935..1629276 (-) 342 WP_003224880.1 DUF3147 family protein -
  PT671_RS07900 - 1629264..1629686 (-) 423 WP_003224879.1 MarR family winged helix-turn-helix transcriptional regulator -
  PT671_RS07905 - 1629821..1630153 (-) 333 WP_003224878.1 YckD family protein -
  PT671_RS07910 - 1630236..1630691 (-) 456 WP_003224877.1 RDD family protein -
  PT671_RS07915 - 1630688..1630815 (-) 128 Protein_1545 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14899.87 Da        Isoelectric Point: 4.4698

>NTDB_id=789147 PT671_RS07880 WP_003224919.1 1626246..1626644(+) (nin/comJ) [Bacillus spizizenii strain B-354]
MIKSWKPQELSISYHQFTVFQKDSAPPVMDWTDEAIEKGFAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
QVTENGIEIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=789147 PT671_RS07880 WP_003224919.1 1626246..1626644(+) (nin/comJ) [Bacillus spizizenii strain B-354]
TTGATCAAGTCATGGAAGCCACAAGAACTGTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTGCACCTCC
TGTTATGGATTGGACTGACGAAGCGATCGAAAAAGGATTTGCTGCGGCGGACGGAGCGATTTCATTTGAAGCACAGAGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACTGTAAACTCCTACGAAAAGAAAGTGACTGTTCCTTTT
CAAGTCACAGAAAACGGAATTGAAATTGAAAGCATTATGTCTAAAAGGCTGTCCTTTGATCTTCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAGATGTCAGATCTGCATGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB E0U2B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

96.212

100

0.962