Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   PUN35_RS12915 Genome accession   NZ_CP117986
Coordinates   2394587..2394985 (+) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus sp. N3378-2at     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2389587..2399985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUN35_RS12890 hxlR 2390325..2390687 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  PUN35_RS12895 hxlA 2390916..2391548 (+) 633 WP_014478804.1 3-hexulose-6-phosphate synthase -
  PUN35_RS12900 hxlB 2391554..2392111 (+) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  PUN35_RS12905 tlpC 2392222..2393943 (+) 1722 Protein_2538 methyl-accepting chemotaxis protein TlpC -
  PUN35_RS12910 nucA/comI 2394111..2394560 (+) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  PUN35_RS12915 nin/comJ 2394587..2394985 (+) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  PUN35_RS12920 bglC 2395022..2396455 (-) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  PUN35_RS12925 - 2396528..2397272 (-) 745 Protein_2542 AAA family ATPase -
  PUN35_RS12930 - 2397291..2397611 (-) 321 WP_014478796.1 DUF3147 family protein -
  PUN35_RS12935 - 2397599..2398021 (-) 423 WP_014478795.1 MarR family winged helix-turn-helix transcriptional regulator -
  PUN35_RS12940 - 2398149..2398481 (-) 333 WP_014478794.1 YckD family protein -
  PUN35_RS12945 - 2398563..2399018 (-) 456 WP_014478793.1 RDD family protein -
  PUN35_RS12950 - 2399038..2399235 (-) 198 WP_121509395.1 hypothetical protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=788913 PUN35_RS12915 WP_014478800.1 2394587..2394985(+) (nin/comJ) [Bacillus sp. N3378-2at]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=788913 PUN35_RS12915 WP_014478800.1 2394587..2394985(+) (nin/comJ) [Bacillus sp. N3378-2at]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977