Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   PUN35_RS08650 Genome accession   NZ_CP117986
Coordinates   1565178..1565369 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. N3378-2at     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1560178..1570369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PUN35_RS08625 appD 1560515..1561501 (-) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -
  PUN35_RS08630 - 1561693..1562478 (-) 786 WP_014479439.1 DUF2268 domain-containing protein -
  PUN35_RS08635 fabF 1562554..1563795 (-) 1242 WP_014479438.1 beta-ketoacyl-ACP synthase II -
  PUN35_RS08640 fabH 1563818..1564756 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  PUN35_RS08645 yjzB 1564921..1565148 (+) 228 WP_031600361.1 spore coat protein YjzB -
  PUN35_RS08650 comZ 1565178..1565369 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  PUN35_RS08655 med 1565384..1566337 (-) 954 WP_014479436.1 transcriptional regulator Med Regulator
  PUN35_RS08660 - 1566428..1566985 (-) 558 WP_014479435.1 hypothetical protein -
  PUN35_RS08665 - 1567067..1567801 (-) 735 WP_014479433.1 hypothetical protein -
  PUN35_RS08670 - 1568050..1568235 (+) 186 WP_003245236.1 YjzD family protein -
  PUN35_RS08675 - 1568281..1568460 (-) 180 WP_003245356.1 YjzC family protein -
  PUN35_RS08680 - 1568638..1569788 (+) 1151 WP_087614160.1 IS3 family transposase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=788899 PUN35_RS08650 WP_003224559.1 1565178..1565369(-) (comZ) [Bacillus sp. N3378-2at]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=788899 PUN35_RS08650 WP_003224559.1 1565178..1565369(-) (comZ) [Bacillus sp. N3378-2at]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1