Detailed information NTG0788607

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: Q6381_RS10240
• Genome accession: NZ_CP130898
• Coordinates: 1948792..1951917 (-)
• Length: 1041 a.a.
• NCBI ID: WP_304674312.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain NJ196610
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1943792..1956917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q6381_RS10225 (Q6381_10225)	pilU	1943882..1945108 (+)	1227	WP_003697786.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
Q6381_RS10230 (Q6381_10230)	yccS	1945225..1947375 (+)	2151	WP_003697785.1	YccS family putative transporter	-
Q6381_RS10235 (Q6381_10235)	-	1947855..1948139 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
Q6381_RS10240 (Q6381_10240)	pilC	1948792..1951917 (-)	3126	WP_304674312.1	PilC family type IV pilus tip adhesin	Machinery gene
Q6381_RS10245 (Q6381_10245)	-	1952605..1952868 (+)	264	WP_017147189.1	hypothetical protein	-
Q6381_RS10250 (Q6381_10250)	gnd	1952948..1954396 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
Q6381_RS10255 (Q6381_10255)	waaA	1954459..1955730 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
Q6381_RS10260 (Q6381_10260)	-	1955771..1956220 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 1041 a.a.
• Molecular weight: 113515.63 Da
• Isoelectric Point: 9.7596

>NTDB_id=788607 Q6381_RS10240 WP_304674312.1 1948792..1951917(-) (pilC) [Neisseria gonorrhoeae strain NJ196610]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGGGGAMAQTHQYAIIMNGRNQPEVKQNVPSSIKDKDRRREYTYYTHRTGGG
SVSFNNNDTLVSQQSGTAVFGTATYLPPYGKVSGFDADALKERNNAVDWIRTTRIALAGYSYIDVICRSYTGCPKLVYKT
RFTFGQQGLKRKAGSKLDIYEDKSRENSPIYKLSDYPWLGVSFNLGSENTVQNSKLFNKLISSFREGNNNQTIVSTTEGN
PISLGDRQREHTAVAYYLNAKLHLLDKKGIEDIAQGKIVDLGILKPHVETTGRSLLDFWARWDIKDTGQIPVKLGLPQVK
AGRCTNKPNPNNNTKAPSPALTAPALWFGPGQDGKAEMYSASVSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGE
IKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPDND
NKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKNGGSDERSYNLKLSYIPGTVPRQ
YFDNDTFALKDSTLAQELRTFAEKGYVGDRYGVDGGFVLRQVELRGQKHVFMFGAMGLGGRGAYALDLSKINGNYPAAAP
LFDVKNGDNNGKNRKNRVELGYTVGTPQIGKTQNGKYAAFLASGYAAKDIDSQENKTALYVYDLKDTLGTPITKIDVPGG
KGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSNSDSSKWSVSTIFEGGKPITSAPAVSRLADKRVVIFGTGSDLSE
EDVVGTDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQTLTKESNTLFLSNNKASGGSADKGWVVKLREGERVTVKPTVVL
RTAFVTIRKYTGNDKCGAQTAILGINTADGGALTPRSARPIVPDHNSVAQYSGHKKTSKGKSIPIGCMEKGGKTVCPNGY
VYDKPVNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVF
F

Nucleotide

• Length: 3126 bp

>NTDB_id=788607 Q6381_RS10240 WP_304674312.1 1948792..1951917(-) (pilC) [Neisseria gonorrhoeae strain NJ196610]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGGGGGGGGCGATGGCGCAAACCCATCAATACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAA
AGCAGAATGTGCCATCTTCAATAAAGGACAAAGACAGGAGGCGCGAATATACTTATTATACGCACAGAACAGGAGGAGGC
TCTGTCTCATTCAACAATAACGATACCCTTGTTTCCCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCC
GCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTGAAAGAGCGCAACAATGCCGTTGATTGGATTCGTACCACCC
GCATCGCGCTGGCAGGCTACTCCTACATCGACGTCATATGCAGAAGCTACACAGGCTGTCCCAAACTTGTCTATAAAACC
CGATTTACCTTCGGTCAACAAGGGTTGAAAAGAAAGGCAGGCAGCAAGCTGGATATATACGAAGACAAAAGCCGCGAAAA
TTCGCCCATTTACAAATTGTCGGATTATCCTTGGTTGGGCGTATCTTTCAATTTGGGCAGCGAGAATACCGTCCAAAATA
GCAAATTATTCAACAAATTGATATCTTCTTTTAGAGAAGGCAATAATAATCAAACCATCGTCTCTACGACAGAAGGCAAC
CCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAA
AAAAGGGATTGAAGATATCGCCCAAGGCAAAATAGTGGATTTGGGTATCTTGAAACCGCACGTCGAGACGACAGGACGAA
GCTTGCTAGATTTTTGGGCTAGGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAA
GCAGGCCGCTGCACCAACAAACCGAACCCCAATAATAATACCAAAGCCCCTTCGCCGGCACTGACCGCCCCCGCGCTGTG
GTTCGGACCCGGGCAAGATGGTAAGGCGGAGATGTATTCCGCTTCGGTTTCCACCTACCCCGACAGTTCGAGCAGCCGCA
TCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGGCCGCTATTCCCTCAAATCTTTGAATGATGGTGAG
ATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCCGATTGGATGACGGCGTACATTTGATCAAACTGAA
TGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAACAACACCGGCAAAAACGACACTTTCGGCATTGTTA
AGGAAGCGAACGTCAATCTTGACGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAATGAC
AATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAAGATACCGCATCCGCGACAACAACGGCAATCGCGA
TTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGCATA
TCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGCACGGTGCCGCGCCAA
TATTTTGATAACGACACTTTCGCTCTCAAAGACTCCACCCTCGCCCAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGT
GGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGCCAAGTCGAACTGCGCGGGCAAAAACACGTGTTTATGTTCG
GCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAATCAACGGAAATTATCCGGCCGCCGCCCCC
CTGTTTGATGTCAAAAATGGCGATAATAACGGCAAAAATCGCAAAAATCGCGTGGAATTAGGCTACACCGTCGGCACGCC
GCAAATCGGCAAAACCCAAAACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGACAGCCAAG
AAAATAAAACCGCGCTGTATGTATATGATTTGAAAGACACCTTAGGTACGCCGATTACAAAAATCGATGTGCCCGGCGGC
AAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGG
CGGCAATATGTACCGCTTTGATTTGAGCAATTCCGATTCTAGTAAATGGTCTGTAAGCACTATTTTCGAAGGCGGGAAGC
CGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGAGTGAA
GAGGATGTAGTCGGTACGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACA
AAACGGCACGGGAGGCGGGCTGCTCGAGCAAACGCTTACGAAGGAAAGTAACACCTTGTTCCTGAGCAATAATAAGGCAT
CCGGCGGATCGGCCGATAAAGGCTGGGTAGTGAAATTGAGGGAAGGAGAACGCGTTACCGTCAAACCGACCGTGGTATTG
CGTACCGCCTTCGTGACCATCCGGAAATATACGGGTAATGACAAATGCGGCGCGCAAACCGCCATTTTGGGCATCAATAC
CGCCGACGGCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATCACAATTCGGTTGCGCAATATTCCGGCC
ATAAGAAAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATAT
GTTTACGACAAGCCGGTTAATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGC
GGGCGGCAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGGGTGCGCACCC
TGCTGATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTC
TTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (508-852)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	73.295	100	0.744