Detailed information NTG0788450

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: PT966_RS17430
• Genome accession: NZ_CP117945
• Coordinates: 3504215..3505378 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain ZY1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3499215..3510378

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PT966_RS17400 (PT966_17400)	-	3499480..3499899 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
PT966_RS17405 (PT966_17405)	comFC	3499973..3500662 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
PT966_RS17410 (PT966_17410)	-	3500668..3500952 (-)	285	WP_003151389.1	competence protein ComFB	-
PT966_RS17415 (PT966_17415)	comFA	3501010..3502395 (-)	1386	WP_044052858.1	DEAD/DEAH box helicase	Machinery gene
PT966_RS17420 (PT966_17420)	-	3502503..3503351 (-)	849	WP_044052857.1	DegV family protein	-
PT966_RS17425 (PT966_17425)	degU	3503449..3504138 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
PT966_RS17430 (PT966_17430)	degS	3504215..3505378 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
PT966_RS17435 (PT966_17435)	-	3505600..3506247 (+)	648	WP_003151384.1	YigZ family protein	-
PT966_RS17440 (PT966_17440)	-	3506252..3507466 (+)	1215	WP_003151383.1	LCP family protein	-
PT966_RS17445 (PT966_17445)	-	3507556..3508632 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
PT966_RS17450 (PT966_17450)	-	3508765..3509961 (-)	1197	WP_044052856.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=788450 PT966_RS17430 WP_003151385.1 3504215..3505378(-) (degS) [Bacillus velezensis strain ZY1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=788450 PT966_RS17430 WP_003151385.1 3504215..3505378(-) (degS) [Bacillus velezensis strain ZY1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948