Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   PQ472_RS05730 Genome accession   NZ_CP117884
Coordinates   1208002..1209237 (+) Length   411 a.a.
NCBI ID   WP_274262107.1    Uniprot ID   -
Organism   Lacticaseibacillus pabuli strain KACC 23028     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203002..1214237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PQ472_RS05700 (PQ472_05700) - 1203571..1204143 (-) 573 WP_274262097.1 hypothetical protein -
  PQ472_RS05705 (PQ472_05705) - 1204163..1204741 (-) 579 WP_274262098.1 SHOCT domain-containing protein -
  PQ472_RS05710 (PQ472_05710) pyrH 1205039..1205758 (+) 720 WP_274262100.1 UMP kinase -
  PQ472_RS05715 (PQ472_05715) frr 1205760..1206317 (+) 558 WP_274262102.1 ribosome recycling factor -
  PQ472_RS05720 (PQ472_05720) - 1206435..1207172 (+) 738 WP_274262103.1 isoprenyl transferase -
  PQ472_RS05725 (PQ472_05725) - 1207189..1207977 (+) 789 WP_274262105.1 phosphatidate cytidylyltransferase -
  PQ472_RS05730 (PQ472_05730) eeP 1208002..1209237 (+) 1236 WP_274262107.1 RIP metalloprotease RseP Regulator
  PQ472_RS05735 (PQ472_05735) - 1209261..1210979 (+) 1719 WP_274262108.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 411 a.a.        Molecular weight: 44780.21 Da        Isoelectric Point: 9.8947

>NTDB_id=788273 PQ472_RS05730 WP_274262107.1 1208002..1209237(+) (eeP) [Lacticaseibacillus pabuli strain KACC 23028]
MTTLIWFLIIFGTIVIVHEFGHYFFARRSGILVREFSIGMGPKLYSHRSGSTAYSLRLLPLGGYVRMAGWQDEEADVRPG
MNVSLISGADGKVTRINTSDKLMLEGGIPVQVDKADLVDDLVIRGYEAGNEDELKTYFVDHDATVIEKDGTEVQIAPRDV
QFQSVSIWRRILVNFAGPMNNFLLAFIAFFLLALGMGVPSTSNTVGVVTHDSAAQVAGLKSGDKIQRVDGTKTTSFNAVA
KAVNSAGNRQITLTVQRGSQTKQMQVKPRSGLIGIRSSIDRGLGTAAKYAVTEPWVMTRQILHALKSLVFGGFSLNKLAG
PVGIYQMTNQATTGGLFTIIWFMASLSINLGIMNLLPIPMLDGGKIVLNFIEMIRRKPLAPEHEGAVMLVGAALVFALMI
AVTINDILRIF

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=788273 PQ472_RS05730 WP_274262107.1 1208002..1209237(+) (eeP) [Lacticaseibacillus pabuli strain KACC 23028]
ATGACGACATTAATCTGGTTTCTGATTATTTTCGGGACCATCGTGATTGTCCACGAATTCGGCCACTACTTTTTTGCGCG
CCGGTCCGGAATTCTCGTCCGCGAATTCTCCATTGGGATGGGACCAAAACTATACAGTCACCGTAGCGGGAGCACGGCAT
ACTCGCTACGACTCTTGCCACTAGGTGGTTATGTCCGCATGGCCGGTTGGCAGGACGAAGAAGCTGATGTTCGTCCCGGG
ATGAACGTTAGCCTGATTTCGGGCGCTGACGGTAAAGTGACACGGATTAACACCTCCGACAAGCTGATGCTTGAAGGCGG
GATTCCCGTGCAGGTCGATAAGGCGGATTTGGTCGATGACCTGGTGATTCGTGGCTACGAAGCGGGTAATGAGGATGAGC
TCAAAACCTACTTCGTGGATCACGATGCGACCGTCATTGAAAAGGACGGCACCGAGGTTCAGATTGCACCACGCGATGTT
CAGTTTCAGAGTGTGTCCATTTGGCGGCGGATTCTGGTTAATTTTGCCGGCCCGATGAACAACTTTTTGCTGGCGTTCAT
CGCGTTTTTCCTGCTAGCGCTGGGCATGGGTGTACCGAGCACATCGAATACAGTTGGTGTTGTGACGCATGACTCTGCTG
CTCAAGTTGCTGGGCTGAAGTCCGGTGACAAAATTCAACGGGTGGACGGTACCAAGACAACCAGCTTTAACGCGGTTGCA
AAGGCCGTAAATAGTGCTGGTAATCGGCAAATTACCTTGACTGTGCAACGTGGCAGTCAGACCAAGCAAATGCAGGTAAA
GCCGCGTTCTGGTTTAATTGGTATTCGGAGCAGTATTGACCGCGGCCTTGGCACTGCCGCTAAATACGCCGTGACTGAGC
CATGGGTCATGACCCGGCAGATTCTCCACGCGCTCAAGTCACTTGTGTTCGGCGGTTTCTCGCTGAACAAGTTGGCTGGC
CCAGTCGGGATCTACCAGATGACTAATCAGGCCACGACGGGCGGGCTATTTACCATTATTTGGTTCATGGCTTCGCTATC
CATTAATCTCGGCATTATGAACCTATTACCGATTCCGATGCTGGATGGTGGTAAAATTGTACTTAACTTTATTGAAATGA
TTCGCCGGAAGCCATTGGCACCTGAACATGAGGGTGCCGTGATGTTGGTCGGGGCTGCGCTTGTCTTTGCTTTGATGATT
GCAGTCACGATTAACGATATTTTGCGAATTTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-398)

PDZ domain (PDZ_6)

(205-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.227

100

0.496
  eeP Streptococcus thermophilus LMD-9

48.227

100

0.496